| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BcerKBAB4_0468 |
|---|
| Symbol | |
|---|
| ID | 5840658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus weihenstephanensis KBAB4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010184 |
|---|
| Strand | + |
|---|
| Start bp | 539553 |
|---|
| End bp | 542450 |
|---|
| Gene Length | 2898 bp |
|---|
| Protein Length | 965 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641375659 |
|---|
| Product | collagenase |
|---|
| Protein accession | YP_001643362 |
|---|
| Protein GI | 163938478 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3291] FOG: PKD repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGC AATCAAAGAT CAATAAAGTG TTGCTTAGTA TTAGTACAAT GGCGCTATCG
CTCGGAGCAA TTCAAACGAA TGTATCAGCA GAAGAAAAGG TACCGTATAA TGTATTGCAT
TCGAAACCAG TTGGAATTGA AAAACCAGTA GATGAGATCG GACACGCTTC TAAAGCCGAG
GAAACATTAT CATTTCAAGA ACGTTTAAAA GTAGGAGATT TTTCACAGCG ACCAGCATCT
ATTACGAAGA ACTCGGCAGT AAAGCAAGCT AAAGAAGGCT ATTCAATGGC TGATTTAAAC
AAAATGAATG ATCAAGAATT AATTGAAACG TTAGGCAGTA TTAAGTGGCA CCAAATTACA
GACTTATTCC AGTTTAATGA AGATGCAAAA GCCTTTTATA AAGATAACGG AAAAATGCAA
GTAATTATAG ACGAATTAGC TCATAGAGGT AGTACATTTA CGAAAGATGA TTCAAAAGGA
ATTCAAACGT TTACTGAAGT GTTACGTTCA GCTTTTTATC TTGCATTTTA TAATAATGAA
TTAAGCGACT TAAATGAAAG AAGCTTCCAG GACAAATGTT TACCAGCGTT AAAAGCTATT
GCGAAAAATC CCAACTTTAA GCTTGGAACA AATGAGCAAG ATACAGTCGT ATCTGCATAC
GGAAAATTAA TTAGTAATGC ATCAAGTGAT GTTGAAACGG TGCAATACGC ATCGGATATT
TTAAAACAAT ATAATGATAA TTTTAATGCA TATGTAGACG ATCGTATGAA AGGACAAGCT
GTATACGATA TGATGCAAGG CATTGATTAT GATATACAGT CTTACTTAAA TGAGGCTCGT
AAAGAAGCGA ATGAAACGAT GTGGTATGGA AAAGTAGATG GGTTTATTAA TGAAATAAAT
CGTATTGCTC TTTTAAATCA AGTAACACCA GAAAATAAGT GGCTCGTTAA TAATGGAATT
TATTTTGCTA GTCGTTTAGG TAAGTTTCAT AGTAATCCAA ATAAAGGATT AGAGGTTGTT
ACACAGGCAA TGCATATGTA CCCGCGTTTA AGTGAGCCGT ATTTTGTTGC AGTAGAACAA
ATTACAACAA ACTATAACGG GAAAGATTAT AGCGGGAATA CGGTAGATTT AGAGAAGATA
CGTAAAGAAG GAAAAGAGCA ATACTTACCA AAAACGTATA CATTCGATGA TGGATCTATT
GTATTTAAAA CTGGGGATAA AGTGTCAGAA GAAAAAATTA AGAGATTATA TTGGGCTGCG
AAGGAAGTAA AAGCGCAATA TCACCGTGTG ATCGGAAATG ACAAAGCTTT AGAACAAGGT
AATGCAGACG ACGTATTAAC GATAGTAATC TATAATACTC CAGACGAATA CCAGTTAAAT
AGACAATTGT ATGGATATGA AACAAACAAC GGTGGAATTT ATATTGAAGA GACAGGGACA
TTCTTTACAT ATGAGCGTAC GCCAGAGCAA AGTATTTATA GTTTAGAAGA GTTATTCCGT
CATGAGTTTA CTCATTATCT TCAAGGGAGA TATGAAGTTC CCGGTTTATT TGGAAGAGGA
GATATGTATC AAAATGAAAG ATTAACTTGG TTCCAAGAAG GGAATGCAGA ATTTTTCGCA
GGATCTACTC GTACAAATAA CGTTGTACCA AGAAAGAGCA TCATTAGTGG ATTATCATCT
GATCCTGCAA GCCGTTATAC AGCAGAGCGT ACACTATTTG CTAAATATGG TTCTTGGGAT
TTCTATAACT ACTCGTTCGC ATTGCAGTCT TACTTATATA CTCATCAATT TGAAACGTTT
GATAAAATTC AAGATTTAAT TCGTGCGAAT GATGTGGGGA ATTATGATAC GTATCGTGAG
ACTTTAAGTA AAGATTCTAA GTTAAATAAA GAGTATCAAG AGTATATGCA GCAGCTAATT
GATAATCAAG ATAAGTACAA TGTGCCGGAA GTAGCAGATG ATTATTTAGC TGAACATGCA
CCAAAAGCAC TAACAGAAGT GAAGAAAGAA ATTAGTGAAA CGTTGTCTAT GAAAGATACA
AAAATGACAA AGCATACATC TCAATTCTTT AATACATTTA CATTAGAAGG CACGTTTACA
GGTAGTGTAA CAAAAGGTGA GTCAGAAGAC TGGAAAGCAA TGAGTAAAAG AGTAAATGAG
GCTTTAGAAC AATTGACGCA AAAAGAATGG AGTGGCTACA AAACGGTTAC AGCATACTTC
GTTAATTATC GTGTGAATAG TTCAAATGAA TTTGAATATG ATGTAGTCTT CCATGGTATC
GCAAAAGATG ACAGAGAAAA TAAAGCTCCG ACGGTTAATG TAAACGGACC TTATAATGGG
TTTGTAAAAG AAGGAATTCA ATTCAAAAGT GATGGATCAA AAGACGAAGA TGGAAAAATC
GTTTCTTATT TATGGGATTT TGGAGACGGC AGAACAAGTA AAGAAGTTAA TCCAGTACAT
GCATATGAAA GAGAAGGAAC TTATAAAGTA GCGTTAGTAG TAAAAGACGA TAAAGGAAAA
GAGAGTAGAA GCGAAACAAC TGTTACAATT AAAGATGGAA GTGTAACAGA ATCAGAACCA
AATAATCGTC CAGAAGAAGC AAATCGTATT GGGTTAAACA CTACTATAAA AGGTAGCCTT
ATCGGTGGGG ATCACACCGA TGTTTATACA TTTAATGTCG CATCAGCGAA AGATATCGAT
ATTTCTGTTT TAAATGAGTA TGGAATCGGG ATGACATGGG TACTTCACCA TGAATCAGAT
ATGCAAAATT ACGCAGCTTA CGGTCAAGCT AATGGAAATC ATATAGAAGC AAAATTTAAT
GCAAAACCAG GTAAGTATTA CTTGTATGTA TATAAATATG ATAATGGTGA TGGAACGTAC
GCATTATCAG TAAAATAA
|
|---|
| Protein sequence | MNKQSKINKV LLSISTMALS LGAIQTNVSA EEKVPYNVLH SKPVGIEKPV DEIGHASKAE
ETLSFQERLK VGDFSQRPAS ITKNSAVKQA KEGYSMADLN KMNDQELIET LGSIKWHQIT
DLFQFNEDAK AFYKDNGKMQ VIIDELAHRG STFTKDDSKG IQTFTEVLRS AFYLAFYNNE
LSDLNERSFQ DKCLPALKAI AKNPNFKLGT NEQDTVVSAY GKLISNASSD VETVQYASDI
LKQYNDNFNA YVDDRMKGQA VYDMMQGIDY DIQSYLNEAR KEANETMWYG KVDGFINEIN
RIALLNQVTP ENKWLVNNGI YFASRLGKFH SNPNKGLEVV TQAMHMYPRL SEPYFVAVEQ
ITTNYNGKDY SGNTVDLEKI RKEGKEQYLP KTYTFDDGSI VFKTGDKVSE EKIKRLYWAA
KEVKAQYHRV IGNDKALEQG NADDVLTIVI YNTPDEYQLN RQLYGYETNN GGIYIEETGT
FFTYERTPEQ SIYSLEELFR HEFTHYLQGR YEVPGLFGRG DMYQNERLTW FQEGNAEFFA
GSTRTNNVVP RKSIISGLSS DPASRYTAER TLFAKYGSWD FYNYSFALQS YLYTHQFETF
DKIQDLIRAN DVGNYDTYRE TLSKDSKLNK EYQEYMQQLI DNQDKYNVPE VADDYLAEHA
PKALTEVKKE ISETLSMKDT KMTKHTSQFF NTFTLEGTFT GSVTKGESED WKAMSKRVNE
ALEQLTQKEW SGYKTVTAYF VNYRVNSSNE FEYDVVFHGI AKDDRENKAP TVNVNGPYNG
FVKEGIQFKS DGSKDEDGKI VSYLWDFGDG RTSKEVNPVH AYEREGTYKV ALVVKDDKGK
ESRSETTVTI KDGSVTESEP NNRPEEANRI GLNTTIKGSL IGGDHTDVYT FNVASAKDID
ISVLNEYGIG MTWVLHHESD MQNYAAYGQA NGNHIEAKFN AKPGKYYLYV YKYDNGDGTY
ALSVK
|
|---|
| |