Gene BcerKBAB4_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_0227 
Symbol 
ID5840251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010184 
Strand
Start bp239010 
End bp239558 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content35% 
IMG OID641375368 
Productrhomboid family protein 
Protein accessionYP_001643123 
Protein GI163938239 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAATAC CATCCACTCG CATTTCCTTA CAACCGATTA TCATTTCTTT ACTTCTTATA 
CAATTAGTCA TGATTATATT GAGCGACTTT TCCCTCTTTC ACCTGGCAGC CTACAATGAA
TATATCGCTA AAGGAGAATG GTGGCGTGTC ATAACTTCCT TACTTGTACA CGTAGACTTA
CAACATTTCC TTTCTAATAG TATTTGTTTA TTCGTATTTG GTTCTTCCAT CGAAAAACAA
CTAGGACACT TTTCTTTCAT CATTATTTTT TTCCTTTCTG GCATTCTCGG GAATATTTCT
TCTTATATTA TTATGCCTCT TGAATATATT CACGCCGGAG CATCTGGTGG TATTTTCGGA
TTACTAGGCG CCCAATTATT TTTATTGTAT AGTCGATATC GTTCTTCAAA ACCAAGAGAC
ATCGCTATTT TTTCAATAAT GATACTTATA TTACTACTAT TTACTTTCTT TAATCCCTCT
GCCAATCCTA TAAGCCATTT AACAGGACTG ATCATCGGCG GCATGTGCAC CCCTTTTTTA
ATAAAGTGA
 
Protein sequence
MLIPSTRISL QPIIISLLLI QLVMIILSDF SLFHLAAYNE YIAKGEWWRV ITSLLVHVDL 
QHFLSNSICL FVFGSSIEKQ LGHFSFIIIF FLSGILGNIS SYIIMPLEYI HAGASGGIFG
LLGAQLFLLY SRYRSSKPRD IAIFSIMILI LLLFTFFNPS ANPISHLTGL IIGGMCTPFL
IK