| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BcerKBAB4_0048 |
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| Symbol | |
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| ID | 5840382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus weihenstephanensis KBAB4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010184 |
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| Strand | + |
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| Start bp | 54386 |
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| End bp | 57916 |
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| Gene Length | 3531 bp |
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| Protein Length | 1176 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641375161 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_001642945 |
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| Protein GI | 163938061 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGGTT TATTAGAGCA ATTTTATAAA AATGAAGAAA TACAATCGGT TATTAATGGG
CTAGAAGATG GGTTGAAAGA ACAACTTGTA TCGGGTATGG CAACATCCTC TCGTTCATTA
TTAATGGCAG CTTTATATAA AAAGACAAAG CAATCACAAC TTATCGTGAC GCACAATTTA
TACCAAGCAC AAAAAGTACA TGAAGATTTA GTGGCGTTAC TTGGTGAAAA AGATGTTTGG
CTATATCCGG TAAATGAATT GATAGCATCG GAGGTTGGTG TTGCAAGTCC AGAATTGAAG
GCACAGCGTA TTGAAGTGTT AAATCGCTTA GCTGCAGGAG AGAATGGGAT TATTGTAGCG
CCAGTTGCAG GGCTGCGTAG GTTTTTACCA ATAAAAGAAT TATGGAAGCA AAGGCAAATT
GAAATCAATC TAGGGCAAGA GATTGATTTA GATGCACTCT TGCATACCTT ACATCATATT
GGTTATGAGC GTAAGTCAAT GGTAGAAGCT CCAGGAGATT TTAGTTTGCG CGGGGGAATA
TTAGATATTT ACCCATTAAC TGAAGAATTA CCATTTCGTA TTGAATTCTT TGATACACAG
GTTGATTCTA TTCGATTATT TGATGTGGAA GAACAGCGCT CTCAAGATAA AAGGGAAAGT
GTTCGGTTTG GTCCGGCAAC AGAGTTTTTA TTTTCACAGG AAGAATTGAA ATCGGGAATT
AAGCATCTTG AAGAAGGTTT GACTAAGACG ATGCAAAAGC TTTCCGATGA TAAATTAAAG
ACTACTGTGC TTGAGACGGT TAGTCATGAA ATTGAAATGT TGAAAAACGG GCAGAGTATA
GAACAAATGT TTAAATATTT ATCTATTTTC TATAAAGAAC CTGCTAGTCT GATAGATTAT
TTACCAGAAA ATGGTGTTGT GATTTTAGAT GAGATTTCCC GTATTCAAGA AACAGCATCA
CATCTTGAAA CAGAAGAAGC GGAATGGTAT ATCTCACTTC TTGGCGAAGG AACAATTATT
CAGGATTTAT CTTTCTCCCA CTCGTTTGAG GAGTTTCTTC ATAATAAAAA AAGAAGTTTT
GTATATTTAA CGTTATTCTT ACGCCATATA GCACACACAC ATCCTCAAAA TATTGTGAAT
GTGACATGTA AAACGATGCA AGATTTCCAC GGACAGATGC ATTTGTTAAA AACTGAAATT
GATAGATGGA ATGAAGGTAA TTTTACGACC GTTGTGCTTG GAACAGATGA TGAACGTGTA
AAAAAACTAC AACATATTTT AAGTGATTAT GATATTGATG CAGACATTGT AGAGGCGACA
GATATCTTAT TGCCTGGAAG GTTACAAATT GCTGTAGGTG ATTTACATGC AGGCTTTGAA
ATGCCAATGC AAAAGTTTGT TGTCATTACT GAAAAGGAGC TTTTTCATAA GAAGGTTAAA
AAATCACAAC GTAAGCAAAA GTTATCTAAC GCTGAACGTA TTAAAAGTTA TTCGGAATTA
AAAGTTGGAG ACCATGTAGT TCATGTAAAT CATGGTATAG GTAAATTTTT AGGTATTGAG
ACATTAGAGA TTAATGGTGT TCATAAAGAT TATTTAAATA TTAAATATCA AGGTAATGAT
AAGTTATACG TTCCAATTGA ACAAATTGAT CAAGTGCAAA AATACGTAGG GTCTGAAGGT
AAGGAACCAA AAGTTTATAA ATTAGGCGGA AATGATTGGA AGAAGGTCAA AACGAAAGTT
GAAAAATCTG TACAAGACAT TGCAGATGAC CTAATTAAAT TATATGCCGA GCGTGAAGCT
TCGAAAGGTT ATGCATATAC ACCAGATACG GCAGAGCAAC AAGAGTTTGA ATCTTTATTC
CCATATCAAG AGACAGAGGA TCAATTACGT TCTATTGAAG AGATTAAGAA AGATATGGAA
CGCGGACGTC CGATGGATAG GCTTCTTTGT GGTGACGTAG GATATGGAAA GACTGAAGTA
GCTATTCGTG CGGCATTTAA AGCAATTATG GATGAAAAAC AAGTTGCGAT TTTAGTACCA
ACAACAATCC TTGCACAACA ACACTATGAA ACAATTCGAG AGCGTTTTCA AGATTATCCG
ATTAATATAG GGTTACTAAG TAGATTCCGT ACACGAAAAC AACAAAATGA AACGATTAAA
GGTTTAAAAG ATGGAACGGT GGATATTGTA ATCGGAACGC ATCGTATTTT ATCTAAAGAT
GTTACTTATA AAGATTTAGG ACTTCTTATT ATTGATGAAG AACAAAGATT CGGCGTTACA
CATAAAGAAA AAATTAAACA ATTGAAAGCA AATGTTGACG TGTTAACATT AACGGCAACT
CCGATTCCAC GTACACTTCA TATGTCTATG CTTGGTGTGC GCGATTTATC TGTTATTGAG
ACACCACCAG AGAATCGTTT CCCAGTACAA ACATATGTAG TAGAGTATAA TCCAGCGTTA
ATGCGAGAAG CGATAGAGCG AGAGTTAGCA AGAGGCGGTC AAATTTACTT CCTATATAAC
CGTGTGGAGG ATATTGAAAG AAAAGCAGAT GAAATTTCGA TGTTAGTTCC AGATGCTCGT
GTAACATACG CACATGGGAA AATGAATGAA GGTGAATTAG AGTCTGTTAT GCTATCGTTT
TTAGAAGGGC AGCATGATGT TCTTGTAAGT ACAACAATTA TTGAGACGGG TGTAGATATT
CCGAATGTAA ATACATTAAT TGTATTTGAT GCAGATCGTA TGGGATTATC GCAGTTGTAT
CAGCTTCGTG GTCGTGTTGG GCGTTCTAAT CGCGTCGCGT ATGCATACTT TGCATACAAA
CGTGATAAAG TGTTATCGGA AGTTGCAGAG AGGCGTCTGC AAGCAATTAA AGAGTTTACA
GAGCTTGGAT CTGGTTTCAA AATTGCGATG AGAGACTTAT CAATTCGTGG TGCGGGTAAT
TTGTTAGGGG CAGAACAACA TGGATTTATT GATTCTGTCG GATTTGATCT ATATTCTCAA
ATGTTAAAAG ATGCAATTGA GCAACGTAGA GGAACAGACG GAGTTGAAAA TACCGTTAAT
GTTGAAATTG ATTTAGAAGT AGATGCATAT TTACCGGATG CGTACATTTC AGATAGTAAA
CAAAAAATTA TGATGTATAA ACAATTTAGA GGTATTTCTG CAATTGAAGA TATTGAAGAG
TTGCAGGAAG AGATGATCGA CAGATTTGGT GATTATCCAC AAGAAGTTGG TTATTTATTA
CAAATTGCAA ACATTAAAGT GTTGGCAATG AAAGAACAAA TTGAGTTAAT TAAGCAAAAT
AAATTTGAAG TAACATTCCT GTTTTCTGAA CAAGCGAGCC AAAATATAGA TGGTGGAAAA
TTATTCATGC TAGGAAGTAG TTTTGGCCGT ATGATCGGTC TTGGTATGGA GGGGTCACAA
TTGAAAATTG TGATGAAAAC GAATGGATTA GAGACGTCGA AATGGTTAAC AATTGCTGAA
AATTTATTAA AAGGCTTGCC AGATGTAAAA AAAGAAGTAA TAAATGCCTA A
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| Protein sequence | MIGLLEQFYK NEEIQSVING LEDGLKEQLV SGMATSSRSL LMAALYKKTK QSQLIVTHNL
YQAQKVHEDL VALLGEKDVW LYPVNELIAS EVGVASPELK AQRIEVLNRL AAGENGIIVA
PVAGLRRFLP IKELWKQRQI EINLGQEIDL DALLHTLHHI GYERKSMVEA PGDFSLRGGI
LDIYPLTEEL PFRIEFFDTQ VDSIRLFDVE EQRSQDKRES VRFGPATEFL FSQEELKSGI
KHLEEGLTKT MQKLSDDKLK TTVLETVSHE IEMLKNGQSI EQMFKYLSIF YKEPASLIDY
LPENGVVILD EISRIQETAS HLETEEAEWY ISLLGEGTII QDLSFSHSFE EFLHNKKRSF
VYLTLFLRHI AHTHPQNIVN VTCKTMQDFH GQMHLLKTEI DRWNEGNFTT VVLGTDDERV
KKLQHILSDY DIDADIVEAT DILLPGRLQI AVGDLHAGFE MPMQKFVVIT EKELFHKKVK
KSQRKQKLSN AERIKSYSEL KVGDHVVHVN HGIGKFLGIE TLEINGVHKD YLNIKYQGND
KLYVPIEQID QVQKYVGSEG KEPKVYKLGG NDWKKVKTKV EKSVQDIADD LIKLYAEREA
SKGYAYTPDT AEQQEFESLF PYQETEDQLR SIEEIKKDME RGRPMDRLLC GDVGYGKTEV
AIRAAFKAIM DEKQVAILVP TTILAQQHYE TIRERFQDYP INIGLLSRFR TRKQQNETIK
GLKDGTVDIV IGTHRILSKD VTYKDLGLLI IDEEQRFGVT HKEKIKQLKA NVDVLTLTAT
PIPRTLHMSM LGVRDLSVIE TPPENRFPVQ TYVVEYNPAL MREAIERELA RGGQIYFLYN
RVEDIERKAD EISMLVPDAR VTYAHGKMNE GELESVMLSF LEGQHDVLVS TTIIETGVDI
PNVNTLIVFD ADRMGLSQLY QLRGRVGRSN RVAYAYFAYK RDKVLSEVAE RRLQAIKEFT
ELGSGFKIAM RDLSIRGAGN LLGAEQHGFI DSVGFDLYSQ MLKDAIEQRR GTDGVENTVN
VEIDLEVDAY LPDAYISDSK QKIMMYKQFR GISAIEDIEE LQEEMIDRFG DYPQEVGYLL
QIANIKVLAM KEQIELIKQN KFEVTFLFSE QASQNIDGGK LFMLGSSFGR MIGLGMEGSQ
LKIVMKTNGL ETSKWLTIAE NLLKGLPDVK KEVINA
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