Gene BcerKBAB4_5546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_5546 
Symbol 
ID5839757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010180 
Strand
Start bp150137 
End bp150811 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content31% 
IMG OID641374706 
ProductABC transporter related 
Protein accessionYP_001642502 
Protein GI163943272 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID[TIGR03608] putative bacteriocin export ABC transporter, lactococcin 972 group 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.361355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000572537 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTAAAT TAATTAATTT AGAAAAAACT TATAAGCTAG GAAAAAAAAC ACAATATGTT 
ATTCAAGGGA TAGATTTAAT TGTTGAACAA GGGGAAATGT TAGCAATCAT GGGAAGAAGC
GGTGCAGGGA AATCGACTTT ACTGCACATA CTAGCTGGAT TAGAAAAACC AAATGGCGGA
AGTTATTACT TCCAAGATAA AGATATCACA CAGCTTAGTT ATAAAGAACT TGCTTTGTTT
AGAAAAAATA ATATAGGTTT TATTTTACAA AATCATGCAC TTATTGAAGA TAAAAATATA
TTCGATAATG TAGCTTTACC ATTATTATAT GGTAAGGCTT CAAAGAAAGA GATTCACTCT
AAAGTGTTAA AGATATTACA AGAAATGGGT TTAGAGGATA AAGTTGATCA ATATCCAAGT
GAATTGTCTG GTGGAGAAGC TCAAAGAATT GCCATTGCAC GGGCTTTAAT AAATGACCCG
GATCTGATTT TAGCTGATGA ACCTACCGGT TCTTTAGATG AAGAGACCGA GCAAACAATT
CTAAATCTTT TTACACAATT GAATAGAATA GGAAAAACAT TCATATTGGT TACTCATGAT
GAAACAGTCG CTAATGTTTG TAATCGAGTT ATTAGACTTA AAGATGGTTA TATTCATGAT
GGATCTGTAA AGTAG
 
Protein sequence
MIKLINLEKT YKLGKKTQYV IQGIDLIVEQ GEMLAIMGRS GAGKSTLLHI LAGLEKPNGG 
SYYFQDKDIT QLSYKELALF RKNNIGFILQ NHALIEDKNI FDNVALPLLY GKASKKEIHS
KVLKILQEMG LEDKVDQYPS ELSGGEAQRI AIARALINDP DLILADEPTG SLDEETEQTI
LNLFTQLNRI GKTFILVTHD ETVANVCNRV IRLKDGYIHD GSVK