Gene BcerKBAB4_5526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_5526 
Symbol 
ID5839677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010180 
Strand
Start bp126091 
End bp126720 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content39% 
IMG OID641374687 
Productrecombination protein U 
Protein accessionYP_001642483 
Protein GI163943253 
COG category[R] General function prediction only 
COG ID[COG3331] Penicillin-binding protein-related factor A, putative recombinase 
TIGRFAM ID[TIGR00648] recombination protein U 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.781388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0647884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACAAG GAAACCGTGG AATGGCTTTT GAAAAGCTTA TTAATCTAGT GAATGAAATG 
TATCAAAGAG GTGGAGTGGC GCTTATAAAC AAGCGTCCGA CTCCTGTGAA GGTGTTAAAG
AGTAAAGGTG GCCGTGTACT AAATGGATTC TATGAAGCTA AGAGTACAGT AGACTATGAC
GGGGTGTATA AGGGACGAGC TATCGCATTT GAAGCGAAGT CTACAGAGAA CCCTACACGA
TTTGATTTAA AGAACATTGC ACAGCATCAA TTAGATTACT TGGAGAAAGC GGAGAAGATG
GGAGCGATTT GTTTCTTCCT TATTGAGTTT AGTAAGGGCA AGTCAGTATT TGTGATACCA
CTGGCAGTTA TTCAATCTTA CGTAAGGATG TCGCAACAGC CAAAAGGCAA GAAGTCGATA
CCAAGAGCAG ACTTTGATAT TTATGGGTAC TTAGTAGAAC AAACAGAACG AGCACCAGTT
GATTACTTAC AATACGTTGA TGAAGCAGTA TCTCCAGTTA TGTTTGATGG CATGATTCAA
TTTGATCAGG ACCATAAAAA GGTAGCGAAT AACATTGAAG CAGCAAAAGA GAAAATGAAC
AACAAAAAAC ACAAATTACT AAAAGCTTAA
 
Protein sequence
MGQGNRGMAF EKLINLVNEM YQRGGVALIN KRPTPVKVLK SKGGRVLNGF YEAKSTVDYD 
GVYKGRAIAF EAKSTENPTR FDLKNIAQHQ LDYLEKAEKM GAICFFLIEF SKGKSVFVIP
LAVIQSYVRM SQQPKGKKSI PRADFDIYGY LVEQTERAPV DYLQYVDEAV SPVMFDGMIQ
FDQDHKKVAN NIEAAKEKMN NKKHKLLKA