Gene BcerKBAB4_5507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_5507 
Symbol 
ID5839751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010180 
Strand
Start bp107386 
End bp108219 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content38% 
IMG OID641374672 
ProductVanW family protein 
Protein accessionYP_001642468 
Protein GI163943238 
COG category[V] Defense mechanisms 
COG ID[COG2720] Uncharacterized vancomycin resistance protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.170032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATAG TGAACTTACG TCCTAAACAG CGTTCTAAGT ATCGTATTAT GCTAGGAACA 
TGGTATTACT CTACAAAGAG GTACATCCAG TGGTTAGCAG ACGGAAAAAC ATACGCAAAA
ACTTTACAAC AAGAAAAGTT ACCCTGTACA GCGATTCAGC ACCGAACGAT ACTACTTCGT
AAGCTCAAGG ATGTAGATAT GTGGTATCAA CAGAATAAAG TTGTTAATTT AAAGATTGCC
ATTAAACAGC TAGATGGTAT CGTCATTAGA CCGGGAGAAA CATTCTCTTA CTGGCGTTTA
ATAGGTAAGC CTACTAGGAG AAAAGGGTAT GTAGAAGGTA TGATACTACA CTATGGATCT
TTTCAAGCAG GCATTGGAGG AGGGCTTTGT CAGCTTTCAA ATTTAATATA TTGGATGACC
TTACATACAC CACTGACAGT AACAGAGCGA TATCGTCATA GCTTTGATGT CTTTCCTGAT
TCCAAGCGGA CCCAGCCGTT TGGAAGCGGA GCGACTTGTT CCTATAACTA TTTGGACTTA
CAAATTAAAA ATGAAACGGA CCAATCGTAT CAACTTCACC TTTATATCAC AGAGAAACAT
TTAGTTGGTG AATGGAGAAC AGCCTATCCG CAGCTTTATC AATATGAAGT TTATGAAAAA
GAACACTCAA TCCAATCTGC ATACTGGGGT GGTTATATAC GACATAATGT TATTCAACGT
AGAGTATATA GCCAACAGAA ACAGTTTGTA GAAGATCAAT ATGTAACGGA GAATCACGCT
ATAATGATGT ACGAACCATT ATTAGCTTGT AATAACGAGG AAAGTGGAGA TTAA
 
Protein sequence
MNIVNLRPKQ RSKYRIMLGT WYYSTKRYIQ WLADGKTYAK TLQQEKLPCT AIQHRTILLR 
KLKDVDMWYQ QNKVVNLKIA IKQLDGIVIR PGETFSYWRL IGKPTRRKGY VEGMILHYGS
FQAGIGGGLC QLSNLIYWMT LHTPLTVTER YRHSFDVFPD SKRTQPFGSG ATCSYNYLDL
QIKNETDQSY QLHLYITEKH LVGEWRTAYP QLYQYEVYEK EHSIQSAYWG GYIRHNVIQR
RVYSQQKQFV EDQYVTENHA IMMYEPLLAC NNEESGD