Gene BcerKBAB4_5468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_5468 
Symbol 
ID5839702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010180 
Strand
Start bp56801 
End bp58402 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content37% 
IMG OID641374637 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001642433 
Protein GI163943203 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5632] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000294756 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0109567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTA GATTTAATAA AAAAGTAGTA GCATTCACGG CAGGATTAAC GGTATTATCT 
TCACCATTGG TATCGTTTGC AGAGGAACAA CAATTAGTAA ACAATAAGCA ACCTACAAAC
GTTCAGGAAC AAAGTAAAAC AACATCAGAT GAACAGGCTT TAAAAAGTAT TGAAGCTAGT
TTTGAAGAGG TAGACGGACG TGGTGGAGGT ACTGTCGACA ATAAGAAAGT AGATAGTCTT
CAACGTTCAG AAGGTATTCA TGAAGAAACA GGTACACTAA CTGTTCCTAA CAATTCAAAC
AGAACAAAAC GTAGTCTGTC TCCCATATCA CCTAGCACCT CTAGTACAAT AAATGGTGTT
CCATTCACTG AATGGATTGT TCCAGCAGGT AACGATAATA TTCGTCCTCA AAACTATATG
AGTCCAAAGT ACATTACAAT TCATGAGACT GATAATACAA GTGTAGGAGC AGGTGCTAGA
AACCACGCCC AATACCTATA TAACCAAGCA GTAGGCAACA CAGACCGAGC TGCATCGTGG
CATTTTACAG TAGACGATAA AGAGATTTAT CAACATCTAC CATTAAACGA GAACGGATGG
CACGCAGGAG ACGGTGATGG TCCAGGTAAT AGAGAATCTA TTGCAATTGA AATCGCAGTT
AACAGTGACG GTAATTATAG TAAAGCGGTA GATAATGCTA AGAAACTTGT AGCTTATTTA
ATGAAAGAAA CTGGTGTACC GTTAAATAAC ATTGTAAAAC ACCAAAGATG GAGTGGTAAA
ATATGTCCTG CTAATATGAT TAATAATGGA CAATGGGATG CATTCGTAAA TGGTGTTGGT
GGGTATTATA ATAATCTTTA TCAACCAAAA GATGACATTA CTGGAGGTTG GTATGAAGAA
GCTATACGAG AGTTAAATAG AAGGGGTATT ATGATAGGGG AAGGAAACGG AGTTTTCGCA
CCTAATAGAG CGATAACAAG AGCCGAATTT GCTCAATTAA TCTCTAAATC TCTAAACCTG
CCAGCTGGAG ATGCTTCATT TAAAGACCTA AACGATGCAA ACTCAACTTT ACGAGATGGT
ATTAAACGTG CTGCAAGTGC AGGTATTATT CTAGGTAGAG GTGATGGTTA TTTTGACCCA
AACACACCTA TTACAAGAGA AGAATCAGCA ATTATTGTAA ACAAGGCTTT ACAGTATAAA
GGTATATGGG GACCAGTTGT AAACCTACCA TTCTCAGACA AAGACCAAAT TAGCTATAAA
GAAGACGTAC AAAGATTGTA TGGCCTAGGT ATTGTAAGAG GTAAGGGTGA CAATCAATAC
GACCCTAAAG GAACAACAAC TCGTGGTGAA ACAGCAACAT TTATTCTAAA TATGCTACAA
GTAATTGAAA ATGGTAGTGT TGAAAAGGTA ATTGGAACGG CTCAAATTAA TGGTATTGGG
GTAAATGTTC GAAGCGGATC AGGTACAAAC TATTCTATTG TTAGAAAGAC AAGTAAAGGC
GAAAAAGTTA CAGTATATGA AGAAAAGAAT GGTTGGCTAA GAATTGGAAC AGGTCAGTGG
ATTTATTATG ACTCTAGTTA TATCGACTAT AACAGATTAT AA
 
Protein sequence
MNIRFNKKVV AFTAGLTVLS SPLVSFAEEQ QLVNNKQPTN VQEQSKTTSD EQALKSIEAS 
FEEVDGRGGG TVDNKKVDSL QRSEGIHEET GTLTVPNNSN RTKRSLSPIS PSTSSTINGV
PFTEWIVPAG NDNIRPQNYM SPKYITIHET DNTSVGAGAR NHAQYLYNQA VGNTDRAASW
HFTVDDKEIY QHLPLNENGW HAGDGDGPGN RESIAIEIAV NSDGNYSKAV DNAKKLVAYL
MKETGVPLNN IVKHQRWSGK ICPANMINNG QWDAFVNGVG GYYNNLYQPK DDITGGWYEE
AIRELNRRGI MIGEGNGVFA PNRAITRAEF AQLISKSLNL PAGDASFKDL NDANSTLRDG
IKRAASAGII LGRGDGYFDP NTPITREESA IIVNKALQYK GIWGPVVNLP FSDKDQISYK
EDVQRLYGLG IVRGKGDNQY DPKGTTTRGE TATFILNMLQ VIENGSVEKV IGTAQINGIG
VNVRSGSGTN YSIVRKTSKG EKVTVYEEKN GWLRIGTGQW IYYDSSYIDY NRL