| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4888 |
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| Symbol | |
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| ID | 5833727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 5465724 |
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| End bp | 5467817 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641370686 |
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| Product | P4 family phage/plasmid primase |
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| Protein accession | YP_001642327 |
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| Protein GI | 163854284 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3378] Predicted ATPase |
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| TIGRFAM ID | [TIGR01613] phage/plasmid primase, P4 family, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.100684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.121248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGCCGA GAACCAAGGA ACCGAAGCTA AAAAACTGGA CAGGCATCAC TCTTGAAATC
GAAGATATCG AGGCTCATGG AACTTTTCCT GAGCACTTCA ACATCGGCAT TAAACTCGGC
TCTAAATCTA ACGGCATTGT TGATGTTGAC CTTGACTGTG ATGCCGCGGT GTCGCTTGGG
GCTAGACTGC TGAACACCGA AACTCGCGTG TTCGGACGCG ATGATAACCG GGCAAGCCAT
TACCTGTATC GGGTTCATGA TCCCCGTAGC ACGTTGAGAT TCAAGCACCC TGTATCCGGC
GAGGTGCTTG TAGAGCTCCG GGGCAATAAC AGTCAGACCG TCCTGCCTGG GTCTATCTAC
GAAGATGGGT CGATCATCCG TTTCGAAGAT TACTCATTGC CGGAACCCTT CGAAACTGAT
TGGGCCACCC TTGAGCGTCA GTGTGGTCTA ATTTCTGCTG GAACCGTTCT GAGCGAGTTC
TGGAAAGAAG GAAGCAGGCA CGCTTTGGCG CTCGCTCTCG GCGGATGGGC TGCTCATAAG
CGCATCGATC AGGGAGCCTT CACGCGACTA ATCGAGGCTG TCGCAGAATA CATGAACGAT
GACGACGTTG CGGATAGAGT TGAATGCGTT CGAGACAGCT ACATCGATCT CGCATCTGGT
AACAAGGTGG CATGGAAGGG CGATCTAGAT CAGCTTATCG ATTATCGTAT CATGTTGGCT
ATCTCTAAAT GGCTGATGGT GAGCGCGAAG CTTGAACTGA ACCCAGCAAC TCAGCAGTCG
AAGAAGTTGC CAACCGTTAC GAGCGATCTA CAGAGTGGGC AAGATTTCTG CGACCATATC
GGAGATAATC TTATCTTCTG TGACGACGAA GAACGTTTTT ATCAGCGACT GAATGATGTT
TATGAACCTG CTTCCCTGGC ATCCGTCAAG GGAACTGTCA TGGATTATGT GAAGTCATTC
GATGCTGATG TGACGAACTA CGAAGAGGCT AAGAAGCTCA AATCGGCGCA GTCTATGTCG
CGCATTAATG CTATCGTTGA CGTATCGAGA TCGAGCCTTC GCATCTCATC GTCTCAGTTC
AACACCGATC CTTTCCTCGT CGGATGTAGG AATGGTGTGC TCGATCTGAG GGCCGGTAAG
CTTGTGAAGC CTTCCTGCAT CGTCACTCGG CGGCTCGGAA CTAACTATGA TAGTCAAGCT
AGATGTCCTT CGTTTGTCGA GTTTTTGCAG CAAGTATTCG ACGCAGATAG AGAGAAGATC
GACTTTATCA GGAGGGCCGT TGGGTATACG TTGACTGGAA GCACTGCTGG TCAATGCATC
TTCGTAGCCA TCGGATCAGG GGCGAATGGT AAGTCAACGT TCCTCAAGAT CATCCAGGAG
TTGATGGGCG ACTATGGCAC TTCTATCCCG TCAAACTCGT TGATGGCGTC GAAGTTCGGA
AACGATAAGA CAGATGATAT TGCCTCTCTC AATGGACGAC GCTTCGTGTC TGCGAGTGAA
GGGGAGATTG GGCAGAAGCT GGCTGTTGCT AAAGTCAAGT TGATGACAGG TGGTGACATA
ATTTCTTGTC GCCCACTCTA CGGGCAATAC TTTAACATGA AGCCAGAGTT CAAAATCTGG
TTTGGAACGA ATGATCTTCC CGTGATTCAG GGTGGCGACG AAGCGATTTG GCGTCGCATC
CACCTAATCG ACTTTCCTGT CAGCTTTAAG GAAGGACAGA GGGACGGTGG ACTGTTCGAC
AGATTGAAAC TTGAACTGCC CGGAATCCTC AGTTGGGCTT TGCAGGGTGT TCAAGAGCTT
GGCGAGATGA GGAATGGCTT TCTGAATCCG CCTGCATCTG TTCGCAATGA AACTACTCGA
TACCGCTCTG ATAGCGATAC TGTAGCTTCG TTTGTTGATG TTGCTTGCGA TAAGGTTGAA
GGTGCCATCG TGATGATGAA TGTATTGCAC GAAGCTTATG TTCGTTGGTG CAACGTCAGT
GGTCTTGAAG CTTTGCCGTC CGGCCTATTT GGCAAAGAAT TGAGCCGACT AGACTTCCCA
ATTAAAAGAA GGAAAGAAGG AAATGGACGA CTGGGAATTA AGTTGAAACA ATGA
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| Protein sequence | MKPRTKEPKL KNWTGITLEI EDIEAHGTFP EHFNIGIKLG SKSNGIVDVD LDCDAAVSLG
ARLLNTETRV FGRDDNRASH YLYRVHDPRS TLRFKHPVSG EVLVELRGNN SQTVLPGSIY
EDGSIIRFED YSLPEPFETD WATLERQCGL ISAGTVLSEF WKEGSRHALA LALGGWAAHK
RIDQGAFTRL IEAVAEYMND DDVADRVECV RDSYIDLASG NKVAWKGDLD QLIDYRIMLA
ISKWLMVSAK LELNPATQQS KKLPTVTSDL QSGQDFCDHI GDNLIFCDDE ERFYQRLNDV
YEPASLASVK GTVMDYVKSF DADVTNYEEA KKLKSAQSMS RINAIVDVSR SSLRISSSQF
NTDPFLVGCR NGVLDLRAGK LVKPSCIVTR RLGTNYDSQA RCPSFVEFLQ QVFDADREKI
DFIRRAVGYT LTGSTAGQCI FVAIGSGANG KSTFLKIIQE LMGDYGTSIP SNSLMASKFG
NDKTDDIASL NGRRFVSASE GEIGQKLAVA KVKLMTGGDI ISCRPLYGQY FNMKPEFKIW
FGTNDLPVIQ GGDEAIWRRI HLIDFPVSFK EGQRDGGLFD RLKLELPGIL SWALQGVQEL
GEMRNGFLNP PASVRNETTR YRSDSDTVAS FVDVACDKVE GAIVMMNVLH EAYVRWCNVS
GLEALPSGLF GKELSRLDFP IKRRKEGNGR LGIKLKQ
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