| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4886 |
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| Symbol | |
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| ID | 5833725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 5460347 |
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| End bp | 5462539 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641370684 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001642325 |
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| Protein GI | 163854282 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.928986 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGTTC CGAACAAGAA GATCAAAAAA GGCACCGCGC TAGCCGCCTC GGCCGCCCTC
GTGCTCGTCG CACAATCGGG TTCGTTGGTT CGCTTCGGAC CGAGTTCGGC CGCCGCCCAG
CTCGCGGCTG ACGCCTCACA GGAGGTGCAG CTCGACGAAC TGTCGGTGGT GGGCAACGGC
GGACCCGCTA GTGGGCCAGC CGGGGGAGCA GGACGCAGGG TGGATGGCTA TCTTGCGAAA
GACAGCGTCA GCGCCACGCG CACCGACACG CCCCTGCGCG AGGTTCCGCA GACGGTCGTG
GTCGTGCCGG ATCAGGTACT CACGGACGCC GCCGCCACGC GCGTGGACAC CGCGCTCGAC
CTCGCAGGCG TCGGCCGGGG GAACAACTTC GCAGGCCTTG GCCTGACCGA GTTCACCATC
CGCGGCTTCT CCACGGGCGA GTTCTACCGC AACGGCTTTC CAATCAACCG CGGCTACCCG
AACTCGCCCG ACGTTGTCTC GATTGCGCGG ATCGAGGTTC TGAAAGGCCC CTCCGCTTTC
CTATATGGGC GCGGCGATCC GGGTGGCACC TTCAACATCG TCACCAAGCA GCCCTTGGCC
GAGCGCGCCC TCTCAATTGG CACGCAGATC GGCAGCTTCA ATCAGAAGCG CAGCACCTTC
GATGCCACCG GAGCCCTCGA TGAAGAGGGT CGGGTGCTCG CCCGCGTCAC TGGCGCCGTC
GAGGATAACG GCAGCTTCCG CAACTTCGTG CGCGGCGACC GCTACTACCT CGCCCCTGTC
ATTGCCTGGA AACCAACCGC CGATACGACG ATCACCCTCG AGGGCGAGCT GGTCAGCACC
GCCACGACCT TCGACCGGGG CGTAGTGCCC ATCAACGGCA ACATCCGCGC CCTGCCAAGA
ACCTTCTTCA TCGGAGAGCC GGGCATCCCG CCGGTCCGCA ACGACAACGC GCTTGGCCAG
CTGCGCATCG AGCACCGCCT CGACCCTAAT TGGGTGGTCA CTGCGGGCGC GCAGGCGCTC
GGCGGCCGTC TCTACGGCGA TGGCGTGGGC GCCATGAACG TACTCGGCGA TGGACGAACC
TTGCGGCGCA CCTTCGAGCA TCGCGACCTA AGCTGGTCCG ATCTCGACCT TCAGCTTAAC
GTCGCCGGCA AGTTCGAGAC TGGCCCCTTC CGCCACACTC TGCTGATGGG CTTCGAGTAC
GACAGCTACC GCTACCGCGA GATCTTCAAC CGCTCGAACG CAAACACCAA CCCCTTCGTG
CTCGACCTGC TCACGCCCCG CTATGGGCAG GTGCCGCTGC CGCAGCTCGG CTCGATCACC
AACTTCCTAC AGAACACCCA GAGCTTCGGG GGTTACGTCC AGGACCAGAT CGACATCACC
CCGCGTCTCC ACGCCCTCAT CGGTGTGCGC GTTGAGGACC TTGGCCTCGT CTCGACGGAC
TATCGGACCG GCCGCACCAC GAGTTTGCAA GGGACGGTCG CGACGCCGCG TTTCGGCCTC
GTCTACGATC TAACCGACGC CGTCTCGATC TACGGTAACT ACGGCCGCTC CTTCCGGCCG
AACACCGGCA CGGACCGAGC GGGTCGCCCG TTCGCCTTCG AGCATGGCGA GGGCTACGAG
GCTGGCGCGA AGTTCAGCCT GCTCGATGGG ACACTGAGCG CCACCGCGGC TGTGTTCGAC
ATCCGGCGCA CCAACGTTCT CACCGTCGAT CCGGTCGATC CGAACTTCAG CGTTGCGGCC
GGTGAGGTAC GCAGCCGCGG CTTCGATCTG ACCGTCGCCG GCTATCTGGC ACCTGGGTGG
CGGGTGTTCG GCACCTACAC GCACGCCGAT GCCGCGGTCT CGCGTGACAA CACGCTGCCG
GTTGGCACGC GGATCGCTAA CATCCCTGCC GACACCCTCG CGTTGCAAAG CGTCTACGAG
TTCCAGGGGC CTGATTTGCG TGGCCTCGGC CTCGGTGGTG GCGTGACTTA TGTCAGCCAG
CGCGTGGCTG GCACCGCGCT CTCGACCTTC CGGTTGCCGG AGTACACGGT CTTCAACCTG
ATTTCGTACT ATTGGGTTAC ACCGGAGGTG CGGGTCTATC TCAACGTCGA CAACCTGTTC
GACACAACTT ACTACGACCG CGCCTTCCAG AACCGCTATG CGACCCCGGG CACGCCCCGT
GCGATCATGG GTGGTGTTGC GGCCCGCTTC TAA
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| Protein sequence | MAVPNKKIKK GTALAASAAL VLVAQSGSLV RFGPSSAAAQ LAADASQEVQ LDELSVVGNG
GPASGPAGGA GRRVDGYLAK DSVSATRTDT PLREVPQTVV VVPDQVLTDA AATRVDTALD
LAGVGRGNNF AGLGLTEFTI RGFSTGEFYR NGFPINRGYP NSPDVVSIAR IEVLKGPSAF
LYGRGDPGGT FNIVTKQPLA ERALSIGTQI GSFNQKRSTF DATGALDEEG RVLARVTGAV
EDNGSFRNFV RGDRYYLAPV IAWKPTADTT ITLEGELVST ATTFDRGVVP INGNIRALPR
TFFIGEPGIP PVRNDNALGQ LRIEHRLDPN WVVTAGAQAL GGRLYGDGVG AMNVLGDGRT
LRRTFEHRDL SWSDLDLQLN VAGKFETGPF RHTLLMGFEY DSYRYREIFN RSNANTNPFV
LDLLTPRYGQ VPLPQLGSIT NFLQNTQSFG GYVQDQIDIT PRLHALIGVR VEDLGLVSTD
YRTGRTTSLQ GTVATPRFGL VYDLTDAVSI YGNYGRSFRP NTGTDRAGRP FAFEHGEGYE
AGAKFSLLDG TLSATAAVFD IRRTNVLTVD PVDPNFSVAA GEVRSRGFDL TVAGYLAPGW
RVFGTYTHAD AAVSRDNTLP VGTRIANIPA DTLALQSVYE FQGPDLRGLG LGGGVTYVSQ
RVAGTALSTF RLPEYTVFNL ISYYWVTPEV RVYLNVDNLF DTTYYDRAFQ NRYATPGTPR
AIMGGVAARF
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