Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4883 |
Symbol | |
ID | 5833722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 5457572 |
End bp | 5458738 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641370681 |
Product | DNA polymerase beta subunit |
Protein accession | YP_001642322 |
Protein GI | 163854279 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.271762 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTTGATC CGGCCAACGA AGCGAACCCA CCGGAATCAG GCTATGACAA GGTTGACACC CGGCACCAAA CTGACAACTC TGAGTATGCT GCATGTCGTG CGCCTAATCG TTTCGTTCAA ATAGGTTCTC TCGTGGTGAC ATCACTCGGC CGCGAACTCG AAGACAGGCT CACTGCGCTT GGCTTAAGTC AATCTCACGC ACGGCTATAC GGATTTCGAA GGGATTTCTC TGCGAATAAG ATGTCTGAGT TGGCGAGCCT ATTGAATGGT CGCGACTCTA TAAAGACATA TGATGGACTA ACTATATATG CGACGGGCTC CTATGCTCGC GGAGAAGCTA GCTTATATTC AGACGTAGAC TTGTTTTTTA TACGGATGGA AAGTCACGTC CCGATTGATG ACTCTCGACT TCGGGAGATC AAGGTTATGT CTGACGTAAT CAAGGCGACT GAAAGAGGAT TAGAACTTCC GCCGCCTTCA AATGATGGTG AATTTCTAAA GATATTGACG CTTGAAGAGA TACTTAAACA CCTTGGCGGA CGCGACGACG ATTATAGAAA CCACTTTACA GCCCGCATGT TGTTGCTGCT CGAAAGCGCG CCAATAACCG GTGCAGATAC TTACGATTCA GTTATTGATG CAGTCATCGA TTCCTATCTT AGGGATTACG AAGACCACGC CGAGGACTTT AGGCCAACGT TCATTGTTAA TGACATAATG AGGTTCTGGA AGACCCTGTG TCTTAACTAC GAGCATAAAA GGAATCAGCA GGAGAATGCC CGAAAGATCA AGCAGAAAAT CCGAAACTTC AAGCTAGGTT ATAGTAGGCT GATGACGTGC TTTGCTACAG TTGGCCTGCT GTCCAGCTAT AAGCAAATTA CCAAAGATGA TCTTGTAAAT ATATGTAAGT CAGCTCCGCT TGATCGCCTT CTGATGTTGG CAGACCGCGA GCCTCTTATT AAGTCTCAAC TTGTTTCTGC TCTTATACAG TACCATTGGT TTCTTGAGAA GACGCAGAAG AGCACTAACG AGTTGGAAGC ATACTTCTCG TGCAAAAACA ATCGGAAGGA GGCATTCACA CACGCCAGTA AGTTCGGCGA TGAGATGTTC AAGATAGTTC AACTCTCGGC GACGCACTCT AATACATTGC GATATCTGGT TGTGTAA
|
Protein sequence | MVDPANEANP PESGYDKVDT RHQTDNSEYA ACRAPNRFVQ IGSLVVTSLG RELEDRLTAL GLSQSHARLY GFRRDFSANK MSELASLLNG RDSIKTYDGL TIYATGSYAR GEASLYSDVD LFFIRMESHV PIDDSRLREI KVMSDVIKAT ERGLELPPPS NDGEFLKILT LEEILKHLGG RDDDYRNHFT ARMLLLLESA PITGADTYDS VIDAVIDSYL RDYEDHAEDF RPTFIVNDIM RFWKTLCLNY EHKRNQQENA RKIKQKIRNF KLGYSRLMTC FATVGLLSSY KQITKDDLVN ICKSAPLDRL LMLADREPLI KSQLVSALIQ YHWFLEKTQK STNELEAYFS CKNNRKEAFT HASKFGDEMF KIVQLSATHS NTLRYLVV
|
| |