| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4871 |
|---|
| Symbol | |
|---|
| ID | 5834251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 5443094 |
|---|
| End bp | 5445055 |
|---|
| Gene Length | 1962 bp |
|---|
| Protein Length | 653 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641370669 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001642310 |
|---|
| Protein GI | 163854267 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCGGC CACTTCGGGT AATCGTGATT TCCGCGGCCG CCATCGGCAC CGTTCTCGTC
GCCGGCTCCC TGGCCCGCTT CAGTTACGCG CCGATGCCGG AGGCAGGCAC CCTTCTCAAT
CCCGAACGCT CTCCGATCGA GACCGCTTTC GACGTCCTCG GCCGCCGCAT CGCACGGGAC
GAGGCCGAGC GGCTGAAAGC CACACCGGAG GGACGCACCG TACTGTCGCC GGAGAGCGGC
GCCGTGGCGA TCGACGACGC GCTGGTTAAG CGGGGCCGCG AGGCGTTCTA TCGCGAGACG
TTCGGCAACG AGGTGTTTCT CTCCGACGTG ATGGGCATGC TCGACGGGGG GCTGACGCCC
TTTGAGGTGG CGCGGGCCAT CCTCATGCTC GGCGGCGCCG GTACCACCAA CCTGAAGGTC
CGCATGGCCC GCGACGTCAC CGTGGGCGAT CAGGTCTGGA AGACGGGCGA ACTCGTCCCG
ACGGGCCTCG ACGTGCCGCG CGGCTCCCCA TTCATCCTCG GCATCCGTAC CTTCTACGAC
CGCGGACATT TGCGTATGGG CATCACCTGC GCGCTGTGTC ACACGGCGGT CGATCCGCAA
TCGGGCAAGG TGGTGGAGGG CGCGCCCAAC ACCGATCTCA ATGCCGGTCT GCTGATGGCG
CTCGCCAGCA ACGCGACCGC CTACTTCATG CATGGCAGCG CCGACCCGTC CGCCCATCCG
GGTGATCCGG CCCGCAGCGT CACCACCGAG GACGGTGCGA AGACCGCCCT CCCCGATCCC
GCCCGGTTCG AGGCCGCGGC CAAGGTGGAG GTCGCGAGCT GGCCCGCTGG CAGCTTCGAT
TCCTCCGCCG ATCGCGAAAC CAACCCGACC TCGATCCCGT CGAGTTTCTC GGCCTACGGC
GAGCCCTATA GCTGGAGCGG GCGTGCCGGG ATCGGACCAT TCAAAGGGCT GTCGGCGCTG
AACAACAACG TCCACGCGGC CAATTCCGAC ACCACCCAGC AGACGAAAGC CGCCAAGACG
CTGTTCGGGC TCGATCCGCA GGTCTATCTC GGCACGGTTC TGCAGGGCGC GGCGGTGGCG
GCCCTGCGCT ACGATCCTGC CTCGGGTAAG CGCCCGACGG ATGTGCTGGG GGCGGCCGAC
CCGACGCCGG GGGCGCCGGG CCTCAACAGC TACGCCGTGC TGCCGTCGTT CCCCGCCACC
AATTACATGA CCGATAACGG CCTGCTGGCC TCGGTCTCCG GGGAGCCGGC CAACTACGCC
AACAACGCGA TGTCGGCTTT CCAGAACCTG TTGCGCGCGC CCGAGCCTTC CCTCGATGCC
GAGCGGGTGA AGAAAGGGCG GGCGGTGTTC GAGCGCGCCG GCTGCGCCGG CTGCCATACC
GGGCCGGCGC TCACCAACCA TCGGGTCATC CCCGTGGGGG AGATCGGCAC GCAGCCGAGC
CGCGCGCACT CGACCGTGCG GATGGAGGCG CGCCTCGCCC CGCCGACGAT CTTTGCCACC
GACACGCCCT TCCCGCTTCC GCCCGATCCC AAACTCGTGC CGATCCCCCT AGAGGGCGAC
GCGCTCAAGC AGGTGCAGCT TGCCTGGGCC CATGCCGGCA CCGGGGGCGG CTACAAGGTG
CCGAACCTCG TCGGCCTCGC CTGGAGCGCA CCTTATCTCC ACGATTCCGG CGTCGCGGTC
GGTGCCGACG CTGACGCGCA GCTCGGCGTT CCAGGTACGC TCGATGCGGG CATCCCGCCC
GATCCGGCCA ACAGCTTGCG GGCGCTGGTC GATCGCAACC TCCGCGCAAA GGTCGTTTCG
GCGAATAAGG CTTCAGCAAA GGCACGCACC GCGCGCGTCA CGGGCGAGGG GCACGCCTAC
TGGGCCGATG CCGAGGCCGG AGTTTCAGGC GAGGAGCAGG CGGATCTCGT CGCCTATCTT
CTCTCGGTCA ACCGCCTGAC CGAACCTGTG CCGGTGCCAT GA
|
|---|
| Protein sequence | MGRPLRVIVI SAAAIGTVLV AGSLARFSYA PMPEAGTLLN PERSPIETAF DVLGRRIARD
EAERLKATPE GRTVLSPESG AVAIDDALVK RGREAFYRET FGNEVFLSDV MGMLDGGLTP
FEVARAILML GGAGTTNLKV RMARDVTVGD QVWKTGELVP TGLDVPRGSP FILGIRTFYD
RGHLRMGITC ALCHTAVDPQ SGKVVEGAPN TDLNAGLLMA LASNATAYFM HGSADPSAHP
GDPARSVTTE DGAKTALPDP ARFEAAAKVE VASWPAGSFD SSADRETNPT SIPSSFSAYG
EPYSWSGRAG IGPFKGLSAL NNNVHAANSD TTQQTKAAKT LFGLDPQVYL GTVLQGAAVA
ALRYDPASGK RPTDVLGAAD PTPGAPGLNS YAVLPSFPAT NYMTDNGLLA SVSGEPANYA
NNAMSAFQNL LRAPEPSLDA ERVKKGRAVF ERAGCAGCHT GPALTNHRVI PVGEIGTQPS
RAHSTVRMEA RLAPPTIFAT DTPFPLPPDP KLVPIPLEGD ALKQVQLAWA HAGTGGGYKV
PNLVGLAWSA PYLHDSGVAV GADADAQLGV PGTLDAGIPP DPANSLRALV DRNLRAKVVS
ANKASAKART ARVTGEGHAY WADAEAGVSG EEQADLVAYL LSVNRLTEPV PVP
|
|---|
| |