Gene Mext_4834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4834 
Symbol 
ID5832013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp5401595 
End bp5402143 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content64% 
IMG OID641370631 
ProductHNH endonuclease 
Protein accessionYP_001642273 
Protein GI163854230 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.492463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.684674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATC TGCAAACCCT GGTGCTCAAC GCGGATTACA GGCCGCTTTC CTACAACCCG 
CTCTCGTTGT GGTCCTGGAA GGACGCATTC ACGGCGCTGT TCCTCGATCG CGTCACTTTG
GTCGCAAACT ACGATGTCGA GGCGCACAGT CCCAGCCGGT CCCTCAAGGT GCCGAGCGTG
GTCGCCCTCA AGAGCTACGT CGCGCTGGCC CGGAGCCCGG CCTTCACCCG CTACAACATC
TACCTGCGCG ACACCTTCTC CTGCCAATAT TGCGGCTTGC GTCTCCCCTC GGGCGGGCTG
ACCTTCGATC ACGTCGTGCC CCGCTCGCGC GGCGGCCTCT CCACCTGGGA GAACGTCGTG
GCGGCCTGCT CACCCTGTAA TCTGCGCAAG GCCAATCGCA CGCCGCACGA GGCTGAGATG
CCTCTGCTCA ACGAGCCGCA CCGGCCGACG CGGCACGAGC TGCACCGCCG CCAACCGGAA
TTCGACCACC GCCAGTATCA CCATACCTGG CTCGACTACC TCTACTGGGA CAGCGAGCTC
GACAGTTGA
 
Protein sequence
MIDLQTLVLN ADYRPLSYNP LSLWSWKDAF TALFLDRVTL VANYDVEAHS PSRSLKVPSV 
VALKSYVALA RSPAFTRYNI YLRDTFSCQY CGLRLPSGGL TFDHVVPRSR GGLSTWENVV
AACSPCNLRK ANRTPHEAEM PLLNEPHRPT RHELHRRQPE FDHRQYHHTW LDYLYWDSEL
DS