| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4823 |
|---|
| Symbol | |
|---|
| ID | 5832144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 5388630 |
|---|
| End bp | 5389139 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641370620 |
|---|
| Product | TspO/MBR family protein |
|---|
| Protein accession | YP_001642262 |
|---|
| Protein GI | 163854219 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.212375 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0256226 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGCC TGCTGGCCGG CGGCTGGGGA CCGCCCGTCA TCGCCGCCCT CGTGGCGCTC
GCCGTCGCGG CGGCGGGCGG GGTCGCGACC CGGACGGACG CTTGGTACCG CCGCCTGCGC
GTCCCCGGCT GGAAGCCGCC GGACTGGGCT TTCGGGCCGA TCTGGACCGT GATCTTCATC
CTCACCACCG CCTCCGCGAT CATCGCCTGG AACGCCGATC CGGACCCGGC CGCGCGGGGC
CGGCTGGTTG CGGTCCTCGC CGTCAACGGC GTGCTCAACA TTGCCTGGAG CGTGATCTTC
TTCCGGCTGC GTCGGCCCGA TTGGGCCTTC GCCGAGGTGC TGCTGCTGTG GCTCTCCATC
CTCGCCGTGA TGGTCATCGT CGGCCAAGTC TCGACGCCTG CAGCCCTGCT CAACCTTCCC
TATCTCGCTT GGGTCAGCAC CGCCGCCTGC CTGAACCTCA CTATCGTCCG GCTCAATCCG
CGCTTCGGGC CGCGCTTCGG GAGCGCGTGA
|
|---|
| Protein sequence | MSGLLAGGWG PPVIAALVAL AVAAAGGVAT RTDAWYRRLR VPGWKPPDWA FGPIWTVIFI
LTTASAIIAW NADPDPAARG RLVAVLAVNG VLNIAWSVIF FRLRRPDWAF AEVLLLWLSI
LAVMVIVGQV STPAALLNLP YLAWVSTAAC LNLTIVRLNP RFGPRFGSA
|
|---|
| |