Gene Mext_4820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4820 
Symbol 
ID5833886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp5385172 
End bp5386059 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content69% 
IMG OID641370617 
Productbacteriochlorophyll/chlorophyll a synthase 
Protein accessionYP_001642259 
Protein GI163854216 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01476] bacteriochlorophyll/chlorophyll synthetase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0428449 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGC CCGCGCCGAG CGCCATCGTC GAGCTTCTCA AGCCCATCAC GTGGTTCGCG 
CCGATGTGGG CGTTTGGCTG CGGGGTCGTC TCCTCCGGTC AGACGCCATC CGGACAGTGG
CTGGTCATCG CCGCGGGCGT GCTGCTCGCC GGACCGCTGG TCTGCGCCAC GAGCCAGGCC
GCCAACGACT GGTTCGATCG CCACGTCGAT GCCATCAACG AGCCTGACCG GCCGATCCCC
TCGGGACGCA TTCCCGGCCG GTGGGGCCTT TATCTCGCGG CCGGCTGGAC GGTCCTGTCG
CTGGCTGTGG CCGCGATGCT CGGACCCTGG ATCCTCGGTG CCGCCCTGTT CGGCCTCGTG
CTTGCCTGGA TCTACTCGGC ACCTCCATTC CGGCTGAAGC AGAATGGCTG GTGGGGCAAT
TCGGCGGTGG CGCTCTGCTA CGAGGGGCTG CCCTGGTTCA CCGGCGCCGC GGTGATGGCT
GCTTCGATGC CCGACCGGCG GGTGCTTCTC GTCGCCCTGC TCTACTCGAT CGGCGCGCAC
GGCATCATGA CCCTGAACGA CTTCAAGTCG GTGGAGGGGG ACCGGGCCAT GGGCCTGCGC
TCGCTGCCGG TGCAGCTCGG CTCCGATCGC GCGGCGCGCT TCGCCTGCCT CGTCATGGCC
CTGCCGCAGA TGGTGGTGGT CGCGCTCCTC CTCCATTGGG AGCGTCCCTG GCATGCCGCG
CTGATCGGCG CCCTGCTCGT GGGGCAGCTC GTCCTGATGA CGCATTTTCT GAAGGCGCCC
CGCGCCCGCG CCGCTTGGTA CAACGGCACC GGCACGACGC TCTACGTCTT CGGCATGTTG
GCCTCGGCTT TTGCCCTGCG CCCGCTCGTG CAAGGGCTGG CGCCATGA
 
Protein sequence
MATPAPSAIV ELLKPITWFA PMWAFGCGVV SSGQTPSGQW LVIAAGVLLA GPLVCATSQA 
ANDWFDRHVD AINEPDRPIP SGRIPGRWGL YLAAGWTVLS LAVAAMLGPW ILGAALFGLV
LAWIYSAPPF RLKQNGWWGN SAVALCYEGL PWFTGAAVMA ASMPDRRVLL VALLYSIGAH
GIMTLNDFKS VEGDRAMGLR SLPVQLGSDR AARFACLVMA LPQMVVVALL LHWERPWHAA
LIGALLVGQL VLMTHFLKAP RARAAWYNGT GTTLYVFGML ASAFALRPLV QGLAP