| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4787 |
|---|
| Symbol | |
|---|
| ID | 5835205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 5347423 |
|---|
| End bp | 5348613 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641370584 |
|---|
| Product | FAD linked oxidase domain-containing protein |
|---|
| Protein accession | YP_001642226 |
|---|
| Protein GI | 163854183 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.231636 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.59925 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCAT ACGCGCCGGC GAGCGAGCAG GAGGCGGCTG CCATCGTGGC GCAGGCCGCC
GGCCGGTCGG AACCGCTGCG TCTCGTCGGC GGCGGCACCA AGGCGGCGCT CGGCCGCCCA
CCGCAGGATA AGGCGACGCT CGCCGCCACG GGGCTCACCG GCATCACCCT CTACGAGCCG
GCCGAGATGG TGGTCGCCGC GCGTGCCGGC ACGCCGCTCG CCGAAGTCGA GGCGCTGCTG
GCAGGCCGCG GGCAGATGCT GCCGTTCGAG CCGATGGATC ACCGCCCGCT CCTCGGCTCC
ACCGGCGAGC CGACCTTCGG AGCGGTCGCG GCGGCCAACA ATTCCGGCCC CCGCCGCATC
AATGCGGGCG CGGCCCGCGA CAGCCTAATC GGCGTGCGCT TCGTCAACGG ACGCGGCCAG
CCGATCAAGT CCGGCGGGCG GGTGATGAAG AACGTCACCG GCCTCGACCT CGTGAAGCTG
ATGGCCGGCT CCTGGGGCAC GCTCGGCCTG TTGACGGAGG TCACCTTCAA GGTGCTGCCG
GTGCAAGAGC AGGTCGCGAC CCTCGTGCTG CCGGGTCTTT CCGACGCCGC CGCGGTCGAG
GCGCTCGCCA CCGCCCTCGG CTCGCCGTTC GAGCTGACCG GCGCCGCCCA CTGGCCTGCC
GGTGTCGGCG GCTCGGAGCC ACGCACGCTG ATGCGCGTCG AAGGTTTCGC CAAATCGGTC
GATTACCGCC TCGGCGAGCT GCGCCGCCTG CTGCGCCGCT ACGGCGCGGC GCAGGTCGTC
GAAGGTGAGG AGAGCGCCGC GCTCTGGCGC GCCGTGCGCG ACGCGACCCC GCTGGCCGAG
CCGCGCGAGG CCGCGATCTG GCGCATCTCC ACCGCTCCGA CCCGCGGGCC GGCGGTCACC
GCGGCGATCG CGGCCGAGCG CGCCGCGCGC TGGTTCTACG ATTGGGGCGG CGGCCTGATC
TGGCTCGCCA CCGATGCCTC CGACGACGCT GGCGCCGGGG TGATCCGCGC CGCGGTGAAA
GCCGCCGGCA GCGGGCACGC GACCCTGGTG CGCGCGCCCG AGACCCTGCG CGCCGCCGTC
CCCGTTTTCG AGCCGCTGCC CGAGCCGCTG ATGCGCATCA CCGCCGGCAT CAAGGCCGCG
CATGATCCGG CCGGCATCTT CAACCCCGGC CGGATGTACG CAGGCGTTTG A
|
|---|
| Protein sequence | MTSYAPASEQ EAAAIVAQAA GRSEPLRLVG GGTKAALGRP PQDKATLAAT GLTGITLYEP
AEMVVAARAG TPLAEVEALL AGRGQMLPFE PMDHRPLLGS TGEPTFGAVA AANNSGPRRI
NAGAARDSLI GVRFVNGRGQ PIKSGGRVMK NVTGLDLVKL MAGSWGTLGL LTEVTFKVLP
VQEQVATLVL PGLSDAAAVE ALATALGSPF ELTGAAHWPA GVGGSEPRTL MRVEGFAKSV
DYRLGELRRL LRRYGAAQVV EGEESAALWR AVRDATPLAE PREAAIWRIS TAPTRGPAVT
AAIAAERAAR WFYDWGGGLI WLATDASDDA GAGVIRAAVK AAGSGHATLV RAPETLRAAV
PVFEPLPEPL MRITAGIKAA HDPAGIFNPG RMYAGV
|
|---|
| |