| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4785 |
|---|
| Symbol | |
|---|
| ID | 5835203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 5345012 |
|---|
| End bp | 5345653 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641370582 |
|---|
| Product | multiple antibiotic resistance (MarC)-related protein |
|---|
| Protein accession | YP_001642224 |
|---|
| Protein GI | 163854181 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.162666 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTCG ATCTGTCCTT CGTCACGAAG GTCTTCGCCG CTTTGTTCGC CATCATGAAC
CCGATCGCGA ATGTGCCGGT GTTCCTCTCC CTCACCGATG GCGCGTCCGA CGCCGTGCGG
CGGCACGTTG CGGTCAAGGC CGCTGTCGGG ACCACGATCG GTTGCCTCGT CTCGATCGTG
GCCGGGCAGG CCATCCTGGA TGCCTTCGGA CTCAGCGTCG ACGACTTCCG TCTGGCGGGC
GGGCTCATCG TCCTGACGAT TGCGCTCTCC ATGCTTCAGG GCTCGTCGAG CCAGACGCAT
GGCCGCAGTC CCAAGGAGAA GGAAGACCAG ATCGATGCGG ACAGCGTCGC CATCTACCCG
CTGACCATCC CCCTGCTCGT CGGGCCGGGG ACGATCGCGA CGCTCATCGT GTTCGGTCAA
ACCGCCAAGG CGCAGGCCAA ATGGCCGGAA CTCGCGCTCG GTGTCGGCGC CTTTCTCACG
CTTCTGACGG TCGCGCTGCT CTCGGCCCCC TGGCTCGGCC ACCACCTGTC CGCCACGGCC
ACCGCGATCA CGCGCCGCCT GATGGGCATG ATCCTGGCCG CGGTTGCGAT GGAGATGATC
GTGACGAGCC TGCGCAACCT CTTCCCCGGC CTCAGCCATT GA
|
|---|
| Protein sequence | MSVDLSFVTK VFAALFAIMN PIANVPVFLS LTDGASDAVR RHVAVKAAVG TTIGCLVSIV
AGQAILDAFG LSVDDFRLAG GLIVLTIALS MLQGSSSQTH GRSPKEKEDQ IDADSVAIYP
LTIPLLVGPG TIATLIVFGQ TAKAQAKWPE LALGVGAFLT LLTVALLSAP WLGHHLSATA
TAITRRLMGM ILAAVAMEMI VTSLRNLFPG LSH
|
|---|
| |