Gene Mext_4754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4754 
Symbol 
ID5834558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp5309679 
End bp5310758 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content70% 
IMG OID641370551 
Productsecretion protein HlyD family protein 
Protein accessionYP_001642193 
Protein GI163854150 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0178648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACGCG ACGACGAAGG GCCGGCCGAA AGCCGGCAAC AGGATCACAT CCCGGCCGAC 
GCGGCGCATT CCGACGAGCC GCCCAAGGCG CAAGGCCCGG CCAAGGCGAT TCCGATCGGA
CGGCGTCGGC GAGGGGGCCG CCTGCTGCGG CTGGCCGCGA CCGGCCTCGT CCTCGCCTTC
GCGGCGGTGG CCGCCACCGT CGTCTGGCAA TTCTACGTGA CGGCGCCCTG GACGCGCGAC
GGGCGGGTCC GCGTGCAGGT GGTCAACATC GCCCCGCAGG TCGCCGGCAC CATCGTCGAG
CTGCGAGTCA CCGACAACCA GGAGGTGAAG AAGGGCGACG TTCTCTACGT CATCGACCCG
TTCGATTATC AGGAGGCGGT GGTCTCGGCG GAGGCCGCGA TCAAGAACCG CGAGGCCGAC
CTCTCGGTGA AGGAGGCGCA GTCGGCCCGG CGCGCCGCGC TCTCGACGGT CTCGACCTCG
GTCGAGGAGA AGCAGCAATT CGCGGGTACC GCCAAGATCG CCGAGGCGGC GCTGGAGACC
GCCCGGTCGC AGCTTTCGCA GGCAAAGAAG AACCTCGAAC GTACGCAGGT CCGCTCGACG
GTGAACGGGC GCGTCACCAA CCTGCTGCTG CGGGTCGGCG ACTACGCGCA GACCGGCACC
GCCAACGCGC GGGTGATCGA CACCGATTCC TTCTGGGTCG ACGGCTATTT CGAAGAAACG
AAGATGGCGC ATATCCACGT CGGCGCCCCC GCCGAGATGG CGCTGATGGG CTACGACGCC
TCGCTCAAGG GAACGGTGGA AAGCCTGACG CTCGGCATCT CGACCGCCAA CGCCGCAACG
AGCACGCAAG GCCTGCCGAA CGTCGATCCG GTCTATACCT GGGTGCGGCT CGCCCAGCGG
GTTCCGGTGC GCATCCGCAT CGACCATGTG CCGCCGGAGG TGACCCTGGT GGCGGGCATG
ACCGCGACGG TGGTGGTCGG CGACGGCCGC GAGGGCCAGC CGGCCTGGGT CAAGGCGGCG
CGCGACTGGA TCCTTGGTCG TCCCGGCCGG ACCGAGCCCG GCGCGGCGCC GAAGAACTGA
 
Protein sequence
MKRDDEGPAE SRQQDHIPAD AAHSDEPPKA QGPAKAIPIG RRRRGGRLLR LAATGLVLAF 
AAVAATVVWQ FYVTAPWTRD GRVRVQVVNI APQVAGTIVE LRVTDNQEVK KGDVLYVIDP
FDYQEAVVSA EAAIKNREAD LSVKEAQSAR RAALSTVSTS VEEKQQFAGT AKIAEAALET
ARSQLSQAKK NLERTQVRST VNGRVTNLLL RVGDYAQTGT ANARVIDTDS FWVDGYFEET
KMAHIHVGAP AEMALMGYDA SLKGTVESLT LGISTANAAT STQGLPNVDP VYTWVRLAQR
VPVRIRIDHV PPEVTLVAGM TATVVVGDGR EGQPAWVKAA RDWILGRPGR TEPGAAPKN