Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4754 |
Symbol | |
ID | 5834558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 5309679 |
End bp | 5310758 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641370551 |
Product | secretion protein HlyD family protein |
Protein accession | YP_001642193 |
Protein GI | 163854150 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0178648 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACGCG ACGACGAAGG GCCGGCCGAA AGCCGGCAAC AGGATCACAT CCCGGCCGAC GCGGCGCATT CCGACGAGCC GCCCAAGGCG CAAGGCCCGG CCAAGGCGAT TCCGATCGGA CGGCGTCGGC GAGGGGGCCG CCTGCTGCGG CTGGCCGCGA CCGGCCTCGT CCTCGCCTTC GCGGCGGTGG CCGCCACCGT CGTCTGGCAA TTCTACGTGA CGGCGCCCTG GACGCGCGAC GGGCGGGTCC GCGTGCAGGT GGTCAACATC GCCCCGCAGG TCGCCGGCAC CATCGTCGAG CTGCGAGTCA CCGACAACCA GGAGGTGAAG AAGGGCGACG TTCTCTACGT CATCGACCCG TTCGATTATC AGGAGGCGGT GGTCTCGGCG GAGGCCGCGA TCAAGAACCG CGAGGCCGAC CTCTCGGTGA AGGAGGCGCA GTCGGCCCGG CGCGCCGCGC TCTCGACGGT CTCGACCTCG GTCGAGGAGA AGCAGCAATT CGCGGGTACC GCCAAGATCG CCGAGGCGGC GCTGGAGACC GCCCGGTCGC AGCTTTCGCA GGCAAAGAAG AACCTCGAAC GTACGCAGGT CCGCTCGACG GTGAACGGGC GCGTCACCAA CCTGCTGCTG CGGGTCGGCG ACTACGCGCA GACCGGCACC GCCAACGCGC GGGTGATCGA CACCGATTCC TTCTGGGTCG ACGGCTATTT CGAAGAAACG AAGATGGCGC ATATCCACGT CGGCGCCCCC GCCGAGATGG CGCTGATGGG CTACGACGCC TCGCTCAAGG GAACGGTGGA AAGCCTGACG CTCGGCATCT CGACCGCCAA CGCCGCAACG AGCACGCAAG GCCTGCCGAA CGTCGATCCG GTCTATACCT GGGTGCGGCT CGCCCAGCGG GTTCCGGTGC GCATCCGCAT CGACCATGTG CCGCCGGAGG TGACCCTGGT GGCGGGCATG ACCGCGACGG TGGTGGTCGG CGACGGCCGC GAGGGCCAGC CGGCCTGGGT CAAGGCGGCG CGCGACTGGA TCCTTGGTCG TCCCGGCCGG ACCGAGCCCG GCGCGGCGCC GAAGAACTGA
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Protein sequence | MKRDDEGPAE SRQQDHIPAD AAHSDEPPKA QGPAKAIPIG RRRRGGRLLR LAATGLVLAF AAVAATVVWQ FYVTAPWTRD GRVRVQVVNI APQVAGTIVE LRVTDNQEVK KGDVLYVIDP FDYQEAVVSA EAAIKNREAD LSVKEAQSAR RAALSTVSTS VEEKQQFAGT AKIAEAALET ARSQLSQAKK NLERTQVRST VNGRVTNLLL RVGDYAQTGT ANARVIDTDS FWVDGYFEET KMAHIHVGAP AEMALMGYDA SLKGTVESLT LGISTANAAT STQGLPNVDP VYTWVRLAQR VPVRIRIDHV PPEVTLVAGM TATVVVGDGR EGQPAWVKAA RDWILGRPGR TEPGAAPKN
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