| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4740 |
|---|
| Symbol | |
|---|
| ID | 5832896 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 5293400 |
|---|
| End bp | 5294110 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641370537 |
|---|
| Product | phosphatidylserine decarboxylase related protein |
|---|
| Protein accession | YP_001642179 |
|---|
| Protein GI | 163854136 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0688] Phosphatidylserine decarboxylase |
|---|
| TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.969312 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC TCATCGAGAC GATCCGCCGG ACGCTCGTGC CGATCCACAA GGAGGGCTAC
CCCTTCATCC TGATCGGCAT CGTGCTCACC GTGGTGCTCG GCTACTTCTC GCAGTTCTTC
GGCTGGATCT TCCTGATCCT CACGCTCTGG GTCTGCTACT TCTTCCGCGA TCCCGAGCGG
GTGGTGCCGG TCGGCGACGG CCTCATCGTC TCCCCCGCAG ACGGGCGCGT GAACCTGATC
TCGACCGTGC TGCCGCCGGC CGAACTCGAC CTCTCGCACG AGCCGATGCT GCGGATCTCG
GTGTTCATGA ACGTGTTCGA CTGCCACGTG AATCGCGTGC CGGTCTCCGG CAAGATCGGG
CAGATCCACT ACACGCCGGG CCTGTTCCTC AACGCCGAGC TCGACAAGGC GAGCGAGGAC
AACGAGCGCA ACGGCCTCGT CATGGAGACG ACGCATCGCG GCCAGCCGGT GCGCATCGGC
GTGGTGCAGA TCGCCGGCCT CGTAGCCCGG CGCATCGTCG GCTTCGTCTC GGCCGGTGAA
TCCAAGCAGG TCGGCGAGCG CTTCGGCCTC ATCCGATTCG GCTCGCGGGT CGATGTCTAC
CTGCCGCTCG GCACCCGCGT GCTTGTCGGC CTCGGCCAGA AGGCGGTGGC CGGCGAGACC
GTGCTGGCCG ACCTCGGTGG CGGCTCGGAG CGGGCCTTCC GCCGCATCTG A
|
|---|
| Protein sequence | MTDLIETIRR TLVPIHKEGY PFILIGIVLT VVLGYFSQFF GWIFLILTLW VCYFFRDPER
VVPVGDGLIV SPADGRVNLI STVLPPAELD LSHEPMLRIS VFMNVFDCHV NRVPVSGKIG
QIHYTPGLFL NAELDKASED NERNGLVMET THRGQPVRIG VVQIAGLVAR RIVGFVSAGE
SKQVGERFGL IRFGSRVDVY LPLGTRVLVG LGQKAVAGET VLADLGGGSE RAFRRI
|
|---|
| |