Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4730 |
Symbol | |
ID | 5831998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 5283111 |
End bp | 5283896 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641370527 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_001642169 |
Protein GI | 163854126 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGC AAGGGAAAGC CGCCGTGGTC ACCGGCTCGA CGAGCGGCAT CGGCCTCGCC ATCGCCAAGA GCTTCGCGAA AGACGGCGCG AACGTGGTCC TCAACGGATT CGGCAACCCC GAAGACATCG AGCGGACCCG CAGCGGCATC GAGAGCGAGT TCGGGGTCAA GGCGGTCTAT TCGCCCGCCG ACCTCACCAA GCCGGACGAG ATCGGCGGGC TGATCGCACT CTCGGTCGAG ACGTTCGGCA GCATCGACAT CCTCGTGAAC AATGCGGGCA TCCAGTACGT CTCGCCGATC GAGGACTTTC CGGTCGAGAA GTGGGACCAG ATCATCGCGC TCAACCTCTG CTCGGCCTTT CATACGCTGC GAGCGGCCGT GCCGCACATG AAGGCGAAGG GCTGGGGCCG GGTCATCAAC ACGGCCTCGG CGCACTCGAT GGTCGCCTCG CCCTACAAGT CGGCCTACGT CGCGGCCAAG CACGGCGTCG TCGGCCTCAC CAAGACGGCG GCGCTCGAAC TCGCCACCCA CGGCATCACC GTGAACTGCA TCTCACCGGG CTATGTCTGG ACGCCGCTGG TGGAAAGCCA GATCCCGGAC ACGATGAAGG CGCGCGGCCT CACCAAGGAG CAGGTGATCG AGGAGGTGCT GCTCAAGGCG CAGCCGACCA AGGAATTCGT GACGATCGAT CAGGTGGCCG CGCTCGCCCT GTTCCTGTGC ACGGACAGCG CCAGCCAGAT CACCGGTGCC AACATCGCCA TGGATGGCGG CTGGACGGCG CAGTAG
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Protein sequence | MSLQGKAAVV TGSTSGIGLA IAKSFAKDGA NVVLNGFGNP EDIERTRSGI ESEFGVKAVY SPADLTKPDE IGGLIALSVE TFGSIDILVN NAGIQYVSPI EDFPVEKWDQ IIALNLCSAF HTLRAAVPHM KAKGWGRVIN TASAHSMVAS PYKSAYVAAK HGVVGLTKTA ALELATHGIT VNCISPGYVW TPLVESQIPD TMKARGLTKE QVIEEVLLKA QPTKEFVTID QVAALALFLC TDSASQITGA NIAMDGGWTA Q
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