Gene Mext_4730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4730 
Symbol 
ID5831998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp5283111 
End bp5283896 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content65% 
IMG OID641370527 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_001642169 
Protein GI163854126 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC AAGGGAAAGC CGCCGTGGTC ACCGGCTCGA CGAGCGGCAT CGGCCTCGCC 
ATCGCCAAGA GCTTCGCGAA AGACGGCGCG AACGTGGTCC TCAACGGATT CGGCAACCCC
GAAGACATCG AGCGGACCCG CAGCGGCATC GAGAGCGAGT TCGGGGTCAA GGCGGTCTAT
TCGCCCGCCG ACCTCACCAA GCCGGACGAG ATCGGCGGGC TGATCGCACT CTCGGTCGAG
ACGTTCGGCA GCATCGACAT CCTCGTGAAC AATGCGGGCA TCCAGTACGT CTCGCCGATC
GAGGACTTTC CGGTCGAGAA GTGGGACCAG ATCATCGCGC TCAACCTCTG CTCGGCCTTT
CATACGCTGC GAGCGGCCGT GCCGCACATG AAGGCGAAGG GCTGGGGCCG GGTCATCAAC
ACGGCCTCGG CGCACTCGAT GGTCGCCTCG CCCTACAAGT CGGCCTACGT CGCGGCCAAG
CACGGCGTCG TCGGCCTCAC CAAGACGGCG GCGCTCGAAC TCGCCACCCA CGGCATCACC
GTGAACTGCA TCTCACCGGG CTATGTCTGG ACGCCGCTGG TGGAAAGCCA GATCCCGGAC
ACGATGAAGG CGCGCGGCCT CACCAAGGAG CAGGTGATCG AGGAGGTGCT GCTCAAGGCG
CAGCCGACCA AGGAATTCGT GACGATCGAT CAGGTGGCCG CGCTCGCCCT GTTCCTGTGC
ACGGACAGCG CCAGCCAGAT CACCGGTGCC AACATCGCCA TGGATGGCGG CTGGACGGCG
CAGTAG
 
Protein sequence
MSLQGKAAVV TGSTSGIGLA IAKSFAKDGA NVVLNGFGNP EDIERTRSGI ESEFGVKAVY 
SPADLTKPDE IGGLIALSVE TFGSIDILVN NAGIQYVSPI EDFPVEKWDQ IIALNLCSAF
HTLRAAVPHM KAKGWGRVIN TASAHSMVAS PYKSAYVAAK HGVVGLTKTA ALELATHGIT
VNCISPGYVW TPLVESQIPD TMKARGLTKE QVIEEVLLKA QPTKEFVTID QVAALALFLC
TDSASQITGA NIAMDGGWTA Q