| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4687 |
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| Symbol | |
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| ID | 5834238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 5240090 |
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| End bp | 5241169 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641370482 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_001642126 |
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| Protein GI | 163854083 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0774003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGGGA CGAAGCGCAG CTACCGGATC GCGGTGATCC CCGGCGACGG CATCGGCAAG
GAAGTCATGC CGGAGGGCGT TCGGGTTCTG GAGCGGGCGG CCGCCCGCCA CGGCTTCGAG
ATCGTGCAGG ACTGGTTCGA TTTCGCGAGC TGCGACTACT ACGAGGCGCA CGGGCGGATG
ATGCCCGAGG ACTGGAAGGC GCAGATCGGC TCCCACGATG CGATCTTCTT CGGCGCCGTC
GGCATGCCCG AGCGCGTGCC CGATCACATC TCACTCTGGG GCTCGCTGAT CCAGTTCCGG
CGCGAGTTCG ACCAATACGT CAACCTGCGC CCGGTCCGCT TGATGCCGGG CGTGCCGTCA
CCGCTGGCCG GCCGCAAGCC CGGCGATATC GACTTCTGGG TCGTCCGCGA GAACACCGAG
GGCGAGTATT CCAACGCGGG CGGGCGGATG TTCGCCGGCA CCGAGCGCGA GTTCGCGGTT
CAGGAATCGG TGTTCACCCG CCACGGCGTA GATCGCGTGC TGAAGTTCGC CTTCGCGTTG
GCGCAGAGTC GGCCCAAGCG TCACCTCACC TCGGCGACCA AATCGAACGG CATCTCGATC
ACCATGCCGT TCTGGGATGA GCGGGTGCGG GCCGTGGCCG AGGGCTACCC TGAGATCCGC
TGGGACCAAT ACCATATCGA CATCCTGACC GCGCATTTCG TGCTGAACCC GGACCGGTTC
GACGTGGTGG TCGCCTCGAA CCTCTTCGGC GACATTCTCT CCGATCTTGG GCCCGCCTGC
ACCGGCACCA TCGGCATCGC GCCCTCGGGC AACATCAATC CGGAGCGGCT TTATCCGTCC
GTGTTCGAAC CGGTGCACGG CTCGGCCCCC GACATTGCCG GCCAGGGGAT CGCCAACCCG
ATCGGCCAGA TCTGGTCGGG GGCGATGATG CTGGAGCATC TCGGCGAGCG GGAGGCCGCG
GCCGAGATCG TCGCCGCCAT CGAGCGGGTG CTCGCCGAGC GGACTTTGCG CACGCGCGAT
CTCGGCGGCA CCGCCGACAC GCAGGCCTGC GGCCGCGCGG TCGAACAGGC GCTGGGCTGA
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| Protein sequence | MGGTKRSYRI AVIPGDGIGK EVMPEGVRVL ERAAARHGFE IVQDWFDFAS CDYYEAHGRM
MPEDWKAQIG SHDAIFFGAV GMPERVPDHI SLWGSLIQFR REFDQYVNLR PVRLMPGVPS
PLAGRKPGDI DFWVVRENTE GEYSNAGGRM FAGTEREFAV QESVFTRHGV DRVLKFAFAL
AQSRPKRHLT SATKSNGISI TMPFWDERVR AVAEGYPEIR WDQYHIDILT AHFVLNPDRF
DVVVASNLFG DILSDLGPAC TGTIGIAPSG NINPERLYPS VFEPVHGSAP DIAGQGIANP
IGQIWSGAMM LEHLGEREAA AEIVAAIERV LAERTLRTRD LGGTADTQAC GRAVEQALG
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