| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4642 |
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| Symbol | |
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| ID | 5834841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 5193862 |
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| End bp | 5196306 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641370437 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001642081 |
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| Protein GI | 163854038 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0885288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAGCA CGCCCCTTTC CGCCGCCGTC GAAGCCTTGA GCGAGGATGC CGCCCAGGCG
CGCCATGCCG AGCTATCGAG GGCGATCGAG CGGGCGAACC AGCTCTACTA CAACGAGGAC
GCGCCCGAAC TCACCGACGC CGAATACGAC GCCCTGCGCC AGGAGCTGGA GGCGATCGAA
GCGCGCTTTC CCGCGCTGAC CGGCACCACC GAGGCGAGCG CGGGCGTCGG CGCCAAGCCT
TCGGAAAAGT TCGCAAAGGT CCGGCACGCA GTGCCGATGC TCTCGCTCGG TAACGCCTTC
GCCGACGAGG ACGTGGACGA GTTCGTGGCC CGCGTGCGTC GCTTCCTCAA CCTGCCGGCC
GAGGAGTCGG TCGCCTTCAC CGCGGAGCCG AAGATCGACG GGCTGTCGCT GTCGCTGCGT
TACGAGGCGG GCCGGCTCGT CACCGCGGCG ACGCGGGGCG ACGGCGAGGT CGGCGAGAAC
GTCACCGCCA ACGCGCTGAC GGTGGACGAC ATCCCGGAAA CGCTCTCCGG CGAAAACATC
CCCGAGGTGC TGGAGGTGCG CGGCGAAGTC TACCTGTCGC ACGAGGATTT CGCGGCCATC
AACGCACGCC AGGAGGCGGC GGGCAAGCCG CTCTTCGCCA ATCCGCGCAA CGCCGCGGCC
GGCTCGCTGC GCCAGCTCGA TCCGGCGATC ACCGCGTCGC GCCCCTTGCG CTTCTTCGCC
TATGCCTGGG GCGAGGTCTC CGAGCCCTTC ACCGACACGC AATCGGCGGT GCTGGAGCGG
TTCCGCGGCT GGGGCCTGCC GGTGAACCCG CGGACCAAGC TGTGCCGCTC GGCCGAAGAG
ATGATCGCGC ATTACCGCAC CATCGAGGCG GAGCGGGCGG GTCTCGGCTA CGACATCGAC
GGCGTCGTCT ACAAAGTGGA CGACCTCGGC TTCCAGCGGC GGCTCGGCTT CGTCAGCCGC
GCGCCGCGCT GGGCGTTGGC GCACAAATTC GCGGCGCAGG AGGCGATCAC CGAACTCCTC
GCCATCGACA TCAATGTCGG CCGAACCGGC TCGCTCAACC CGCTGGCGCG CCTCAAGCCC
GTCACCGTCG GCGGCGTGGT CGTCTCGAAC GCGACTTTGC ACAACGAGGG CTACGTCCAG
GGCGTGGGCG CCGACGGCGA GCCGATCCGC GAGGGTCGCG ACATCCGCGT CGGCGACACC
GTGATCGTGG TGCGCGCGGG CGACGTCATC CCGAAGGTGC GGGATGTGGT GATCGAGAAG
CGCCCGGCCG ACGCCGTTCC CTACGTCTTC CCGGATACCT GCCCGGCCTG CGGCAGCCGG
GCCGTGCGTG AACTCAACCC GCGTACGAAA AAACTCGATG CGATCCGCCG CTGCACCGGC
GGGCTGATCT GCCCGGCGCA GGGGGTCGAG CGGCTGAAGC ACTTCGTGTC GCGCAACGGC
TTCGACCTCG AAGGCTTCGG TCAGACCTAT ATCGAGGTGC TGTTCGAGGC CGGCCTCGTG
AAGCAGCCCG CCGACCTGTT CCGCCTGGAG TTCGAACCGC TGAAGGCGGC GATCGTCGCC
CGCCGCGAAA CGCTCTCCGC GCAGCGCCGT AGCGAGGGCG AGCCGGCGCC GAAGAAGCCG
ACTAAGAAGA AGGGTGAGGA GGAGGACAAG GCGATCAAGA ACCTGCTCGC CTCGCTCGAC
GCCCGCCGAA CAATCCCGCT CAACCGCTTC CTGTTCGCCC TCGGCATCCC GCAAATCGGC
GAATCGACGG CCAAGGCGCT GGCCAAGCGC TTCCCCGACA TGCCCTCCCT GATGGCGGCC
CTCGAAGCGG CCACGCGGGA GCAGGCAGGC CGCGACTGGC TCGAACTCTC GGCGCTGCCG
CGGATCGGGC CCGGCACCCG CGACCGCCTG TTCGAGACCC TCGACCCGCT GCCCGGCGAG
GCGATGCAGG ATTTGAGCCT CGGCGCCCGC CTGCGGGGGC GGCTGACGCC GTCCCAGCGC
GAGGCCGTGC TCGCCCATTA CGGCAGCGAG GAAAAGGTCG ACGCGGCGCT GGAGCGGGCC
GCCTCGCAGC GCCCCGGCGA CGCCTACCGG CTGTTCGCCG ACGATGGCGA GATCGGCCCC
GTGGCGACGG ATTCGCTGAT CCAATTCTTC TCCGAGCCGC ACAACGACGC GGCGGTGCGG
GCGCTGCTCG AAGAGGTGGG AACCGAGCCG CTGGCCACCA CGACCTCGGC GGCGGCGTTT
GCCGGCAAGA CGGTGGTGTT CACCGGCTCC CTCGAGAAGA TGACCCGAAG CGAGGCCAAG
GCCACCGCCG AGCGCCTGGG CGCCAAGGTC TCCGGCTCGG TCTCCGCCAA GACCGACCTC
GTGGTCGCCG GCCCCGGCGC CGGCTCGAAG CTCAAGGACG CCGAGAAGCA CGGGGTGAAG
GTGGTCTCGG AGGACGATTG GCTGGCGATG CTGGCGGAGG CGTAA
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| Protein sequence | MPSTPLSAAV EALSEDAAQA RHAELSRAIE RANQLYYNED APELTDAEYD ALRQELEAIE
ARFPALTGTT EASAGVGAKP SEKFAKVRHA VPMLSLGNAF ADEDVDEFVA RVRRFLNLPA
EESVAFTAEP KIDGLSLSLR YEAGRLVTAA TRGDGEVGEN VTANALTVDD IPETLSGENI
PEVLEVRGEV YLSHEDFAAI NARQEAAGKP LFANPRNAAA GSLRQLDPAI TASRPLRFFA
YAWGEVSEPF TDTQSAVLER FRGWGLPVNP RTKLCRSAEE MIAHYRTIEA ERAGLGYDID
GVVYKVDDLG FQRRLGFVSR APRWALAHKF AAQEAITELL AIDINVGRTG SLNPLARLKP
VTVGGVVVSN ATLHNEGYVQ GVGADGEPIR EGRDIRVGDT VIVVRAGDVI PKVRDVVIEK
RPADAVPYVF PDTCPACGSR AVRELNPRTK KLDAIRRCTG GLICPAQGVE RLKHFVSRNG
FDLEGFGQTY IEVLFEAGLV KQPADLFRLE FEPLKAAIVA RRETLSAQRR SEGEPAPKKP
TKKKGEEEDK AIKNLLASLD ARRTIPLNRF LFALGIPQIG ESTAKALAKR FPDMPSLMAA
LEAATREQAG RDWLELSALP RIGPGTRDRL FETLDPLPGE AMQDLSLGAR LRGRLTPSQR
EAVLAHYGSE EKVDAALERA ASQRPGDAYR LFADDGEIGP VATDSLIQFF SEPHNDAAVR
ALLEEVGTEP LATTTSAAAF AGKTVVFTGS LEKMTRSEAK ATAERLGAKV SGSVSAKTDL
VVAGPGAGSK LKDAEKHGVK VVSEDDWLAM LAEA
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