| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4635 |
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| Symbol | murD |
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| ID | 5831611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 5184008 |
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| End bp | 5185375 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641370429 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_001642074 |
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| Protein GI | 163854031 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0173708 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCAG CCACCACCTT CGCCGGCCAG AAACTCGCCC TGTTCGGCCT CGGCGGGTCC
GGGCTCGTCA CCGTCCGCTC GCTGCTGGCC GGCGGCGCCG ACGTGCTGGC CTGGGACGAC
AACGCGGGCA GCCGCGACCG CGCCCGCGAG CAAGGCATCA CCGTCACCGA TCTCAACGAG
GCCGACTGGT CGGGCTTCTC GGCCCTGGTG CTGGCGCCCG GCGTGCCGCT GACGCATCCC
GAGCCGCACT GGACCGTGGG ACTGGCGCGG CAGGCCGGCA TCCCGGTCAT CGGCGACATC
GAGATTTTCT GCCGCGAGCG CGCGGCCCTG GCCCCCGACG CGCCGTTCGT GGCCATCACC
GGCACCAACG GGAAATCCAC CACCACGGCG CTCACCGCCC ACCTGCTGCG CCATGCCGGG
CGCGACGTGC AGATGGGCGG CAATATCGGC ACCGCGATCC TGTCGCTGGA GCCGCCCGCG
GCAACCCGCG TCCACGTGGT CGAACTGTCG TCGTTCCAGA TCGACCTGAC GCCCTCGCTC
AAGCCCGGCG TCGGCATCCT GCTCAACCTG ACGCCGGATC ATCTCGACCG TCACGGCACC
ATGGAGAACT ACGCCGTGAT CAAGGAGCGG CTGGTGGCGG GCGCGGACCT CGCGGTGATC
GGCGTCGACG ACCCCTACTG CGCAGCGATC GCCGAGCGCC GCACGGGCGA GCGCATCCGC
CTCCATATTG AGGGGCACGG CGACGCGGCG GGCGACTATG TCGGTGCCAA CGGTACGGTG
CGCGGGCCCG ACGGCGCCGT GATCGCCGAA GTCTCCGGCA TCCAGGCGCT GCTCGGCGAC
CACAACCTCC AGAACGCCGC CGCCGCGGTT GCCGCCGCGA TCCGGCTCGG TCTCACCAGC
ACGGAGATCG CGGCGGGGCT GAAGAGCTTT CCCGGCCTCG CCCACCGGAT GGAGCCGCTA
CGCCGGATCG GCCCGACGCT GTTCGTCAAC GATTCCAAGG CGACCAACGC CGATTCGACC
GAGAAGGCGC TGCTGGCCTT CCGCGACATC CACTGGATCG TCGGCGGCAA GGCGAAGGAG
GGTGGCATCG AGCCGTTGGC GCCGCTGTTC GACCGCGTCG CCCATGCCTA CCTGATCGGC
GCATCGAGCG AGGCCTTCGC CGCGACGCTG GAAGGACGCG TCGCCTTCAC CCGCTGCGGC
ACGCTGGAGG CCGCGACCGA GGCAGCGGCG CGGGCCGCCC GCGCATCCGG CACCGAGGCG
CCCGTCGTGC TGCTATCGCC GGCCTGCGCC TCCTACGACC AGTTCCCGAA CTTCGAGGTC
CGCGGCGACC GTTTTCGGAC CCTGGTCGCC GCGCTGCCGA ACGCCTGA
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| Protein sequence | MTPATTFAGQ KLALFGLGGS GLVTVRSLLA GGADVLAWDD NAGSRDRARE QGITVTDLNE
ADWSGFSALV LAPGVPLTHP EPHWTVGLAR QAGIPVIGDI EIFCRERAAL APDAPFVAIT
GTNGKSTTTA LTAHLLRHAG RDVQMGGNIG TAILSLEPPA ATRVHVVELS SFQIDLTPSL
KPGVGILLNL TPDHLDRHGT MENYAVIKER LVAGADLAVI GVDDPYCAAI AERRTGERIR
LHIEGHGDAA GDYVGANGTV RGPDGAVIAE VSGIQALLGD HNLQNAAAAV AAAIRLGLTS
TEIAAGLKSF PGLAHRMEPL RRIGPTLFVN DSKATNADST EKALLAFRDI HWIVGGKAKE
GGIEPLAPLF DRVAHAYLIG ASSEAFAATL EGRVAFTRCG TLEAATEAAA RAARASGTEA
PVVLLSPACA SYDQFPNFEV RGDRFRTLVA ALPNA
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