Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4616 |
Symbol | |
ID | 5832684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 5158901 |
End bp | 5161840 |
Gene Length | 2940 bp |
Protein Length | 979 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641370410 |
Product | putative monovalent cation/H+ antiporter subunit A |
Protein accession | YP_001642055 |
Protein GI | 163854012 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
TIGRFAM ID | [TIGR00940] Tmonovalent cation:proton antiporter [TIGR00943] monovalent cation:proton antiporter |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.641343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.000524948 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCGTCCA ACGCTTTTCT CGCCGCCGCC GCGATCCTCC CCTTCGCGGG CTCCGTGCTC ACGGGCGCCC TGCCGAGCCA TGCGCGCACC GCCGCGGCCG TGCTCGCCGG GTTCGTGACC CTGGCCAGCC TCGGCTGCAT CCTCGCGCTC ACGCCGCAAC TGGCCGAGGG CGGCACCGTC GTCCATGCGG TCGAGTGGCT GCCGAGCCTC GGCGTCAACC TCGTCCTGCG ACTCGACGGG CTCGCCTGGC TGTTCGCGGT GCTGGTGCTC GCCATCGGCG CGCTGGTGGT GCTCTACGCG CGCTACTACA TGGCCGCCGC CGACCCGGTG CCGCGGCTAT TCTCCTATTT TCTTGCTTTC GTCGGTGCGA TGCTCGGCAT CGTTCTCTCC GGCAACCTGA TCCAGCTCGT CCTGTTCTGG GAATTGACGA GCATCGTCTC GTTCCTGCTG ATCGGCTACT GGTACGACAA CGCTGCGGCC CGTGACGGCG CGCGGATGTC GCTGACCATC ACAGCGGCGG GCGGCCTGTG CCTCTTGGTC GGAACGGTGC TGATCGGACG CATCGTCGGC AGCTACGATC TGGCCACCGT CCTGGCCTCG GGCGATACGA TCCGCAACAG CCCGCTCTAC CTGCCGGCCC TGGTGCTGGT TCTGGCGGGC GCGCTCACCA AGTCGGCGCA GTTCCCGTTC CACATCTGGC TGCCGCGGGC GATGGCGGCG CCGACGCCGA TCAGCGCCTA CCTGCACTCG GCCACCATGG TGAAGGCCGG CATCTTCCTG ATGATCCGCC TGTGGCCGGT GCTCGCGGGC ACCGACGCGT GGTACTGGAT CGTCGGCAGC GCCGGCATGG CGACCCTGCT GATCGGCTCG TGGAGCGCGA TCTTCCAGCA CGACCTGAAG GGTCTGCTCG CCTACTCGAC CATCAGCCAT CTCGGGCTGA TCACGCTGCT GCTCGGCCTC AACTCGCCGC TCGCCGTGGT CGCCGCGATC TTCCACACGG TGAACCACGC GACCTTCAAG GCCTCGCTGT TCATGGCGGT GGGCATCATC GACCACGAGA CCGGCACGCG CGACATGCGC CGCCTCTCCG GCCTGTGGCG GGCGATGCCC TATACCGGCA CGCTCGCCAT GGTCGCCGCC GCGGCGATGG CCGGCGTGCC GTTGCTCAAC GGCTTCCTCT CGAAGGAGAT GTTCCTCTCC GAGGCGGTCG ACAACATGGG CGACCACCCG ATCCATATCG CCCTGCCGGT GCTGGCGACG CTGGCCAGCG CCTTCACCAT GCTCTACTCG CTGCGCTTCA TCCGCCAGAC CTTCTTCGGC CCGCCCCCGC ACGACCTGCC GAAGACGCCG CACGAGCCGG TGCGGTGGAT GCGCATCCCG ATCGAGATGC TGGTGCTCGC CTGCATCGCC ATCGGCCTCG TCCCGAACCT CACCATCGGC CCGGCCCTGG AGCGGGCGGT GAGCGCGGTG TTCGGCGCGG AGACCCCGAC CTACAGCCTC GCGATCTGGC ACGGCTTCAA CGCACCGCTG GCGCTCAGCA TGATCGCCCT CGTCGGCGGC GTGCTGCTCT ACGTCCTGTT CGGAAAGCGC ATCAACACCA ACCCCCGCGG CGGCCCGTGG CTGATGGACC GCCTCGACGG CGGCTGGGTG TTCGAGCGCG TAATGACCGG GCTGACGAAG GGCGCCCGCC TGCTGGAACG GGCCTTCGGC GCCGAGCGGC TCCAGCCGCA ATTGCGCATC CTGTTCCTCG CCGCCCTGCT CGCCGCGCTG GCGACCGGCG TCGCCCGCGG GCTCGACCTC TTCGCGCTCG GCCGGCTCAC GCCGTTCGAT CCCGCCTTCG CGCTGATGTG GCTCGTCGGC GGCGCCTGCG CGATCGGCGC GGCGGAACGG GCGAAGTATC ATCGCCTCTC GGCCACGATC TTCGTCGGCG GGGCCGGGCT CGTCAGCAGC CTGACCTTCC TCTGGCTCTC GGCGCCGGAT CTGGCGGTGA CGCAGATCCT CGTCGAGATC GTCACCACCG TCATGCTGCT GCTGGGCCTG CGCTGGCTGC CCAAGCGCGA CCGGGCGATT CCCGCGCCCG CCGCCGAGAA GGCGCGGGCC CGCCGCCGCC GTCTCGTCGA TCTCTGCATC GCCAGCTTTG CCGGGCTGGG GCTCGCCGGC CTCGCCTACG CCGTGATGAC CCGCCCGGCC GGCGACGGCA TCGCGCGCTG GTTCATCGAG GAGGCCTATC CGCAGGCAGG CGGGCGCAAT GTCGTCAACG TGCTGCTGGT CGATTTCCGC GCCTTCGACA CGCTGGGCGA GATCTCGGTG CTCGGCATCG TCGGCCTCAC GGTGTTCGCG CTGCTGCGCC GCTTCCGCCC GGCCCCGGAC AGCCTGGAGC GTCCCAAGCA GCAGCACCAC CACGACGCCT ACGACCGCGC CCGCGAGGGC CGCAAACCCG GCGACACCAC CGCCGACGCC CTGATGGTGC CGCGGGTGGT GATGACGTGG CTGTTCCCGT TCATCGTTCT GCTGTCGCTG CACCTGTTCC TGCGCGGCCA CGACCTGCCC GGCGGCGGCT TCGCGGCGGG CATCGCGCTC ACCATCGCCT TCATCCTGCA ATACATGGCC TGCGGCGCGC GGTGGGTGGA GGAGCGCCTG CGCATCCAGC CGATCTCGTG GATCGGTCTC GGCCTGTTGA TCGCGGTGGG CGCCGGAGCG GCCTCGTGGG CGTTCGGGCG GCCCTTCCTC ACCGCCTACT TCGCCTATTG GGAGCTGCCA CTGCTCGGCA AGGTCCCGGC GGCGAGCGCC CTGGTGTTCG ATCTCGGGAT CATGGTCCTG GTGGTCGGCG CGAGCGCGCT GATGCTGGTG GCGCTCGCCC ACCAATCCCT GCGCCGCACC CGCAGCGCGG AGGCGGAGGC CGAACTGGAT GCCGAACAGG CCGGCGAGGA GACGGCGTAA
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Protein sequence | MSSNAFLAAA AILPFAGSVL TGALPSHART AAAVLAGFVT LASLGCILAL TPQLAEGGTV VHAVEWLPSL GVNLVLRLDG LAWLFAVLVL AIGALVVLYA RYYMAAADPV PRLFSYFLAF VGAMLGIVLS GNLIQLVLFW ELTSIVSFLL IGYWYDNAAA RDGARMSLTI TAAGGLCLLV GTVLIGRIVG SYDLATVLAS GDTIRNSPLY LPALVLVLAG ALTKSAQFPF HIWLPRAMAA PTPISAYLHS ATMVKAGIFL MIRLWPVLAG TDAWYWIVGS AGMATLLIGS WSAIFQHDLK GLLAYSTISH LGLITLLLGL NSPLAVVAAI FHTVNHATFK ASLFMAVGII DHETGTRDMR RLSGLWRAMP YTGTLAMVAA AAMAGVPLLN GFLSKEMFLS EAVDNMGDHP IHIALPVLAT LASAFTMLYS LRFIRQTFFG PPPHDLPKTP HEPVRWMRIP IEMLVLACIA IGLVPNLTIG PALERAVSAV FGAETPTYSL AIWHGFNAPL ALSMIALVGG VLLYVLFGKR INTNPRGGPW LMDRLDGGWV FERVMTGLTK GARLLERAFG AERLQPQLRI LFLAALLAAL ATGVARGLDL FALGRLTPFD PAFALMWLVG GACAIGAAER AKYHRLSATI FVGGAGLVSS LTFLWLSAPD LAVTQILVEI VTTVMLLLGL RWLPKRDRAI PAPAAEKARA RRRRLVDLCI ASFAGLGLAG LAYAVMTRPA GDGIARWFIE EAYPQAGGRN VVNVLLVDFR AFDTLGEISV LGIVGLTVFA LLRRFRPAPD SLERPKQQHH HDAYDRAREG RKPGDTTADA LMVPRVVMTW LFPFIVLLSL HLFLRGHDLP GGGFAAGIAL TIAFILQYMA CGARWVEERL RIQPISWIGL GLLIAVGAGA ASWAFGRPFL TAYFAYWELP LLGKVPAASA LVFDLGIMVL VVGASALMLV ALAHQSLRRT RSAEAEAELD AEQAGEETA
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