Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4585 |
Symbol | |
ID | 5833956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 5122841 |
End bp | 5123671 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641370379 |
Product | polysaccharide deacetylase |
Protein accession | YP_001642024 |
Protein GI | 163853981 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.701791 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCACT GGGTCAAAAC GACGTTGCGC CGCTCGCCGG CCCTGCGCGC GCTCGCCCTG CGCGGGAGCG CCCTGTTCAA GTCGTTGGCC TGCGCCGAGC CCGGTCTCTA CACCCTGTGC TACCATCAGG TGCCCGAAGC CCAGCAGGAT CGTTTCGCCG CGCAATTGCG CCATCTCGGC CGGTACGGCG ATTTCATCGA TGCCGACGGG GCCGCCGAGC GCCTTGCCGC AGGCTGGCCG GCCCGCGACC GCGCCTTCCT CGTCACCTTC GACGACGGCT ATGCCGACAC CTTCGAGGTG GCGCGTCCGG TTCTGCGGGC CCTGGGCATT CCGGGCATCG TCTTCCTTAT CAGCGACTGG ATCGACGCGC CGCCGAGCAC GCCGCCCGGC CTCGACCGGG CGACGTCCCT GTCCCCGAGC GGGCGCCTCT ATATGAGACG GGCCGAGATC GCGGCTTGGT GCGCCGACGG TCTCGACATC GGATCCCACA CCGCCACCCA CCAGCGCTTG AGCCGGCTCG ACCGCACGCG GGTCGCCGAC GAGATCACCC GCTCCCGGCG CGACCTTGCT GCCCTCACCG GCCGGGAGAT CCGCCATTTC GCCTGCCCCT GGGGTGTCGC CGGCCACGAT TTCGATCCGG AGCATGACCC GGCGCTGGCC CTGGAGAGCG GCTACCGGAC CTTCTTCACC ACGCGGCGCG GCCGGGCGCT GAGCGAAGCG GACCTGCCGG CGATGCCCCG CCACGTGGTC GAGCCGCATT GGCCGGTCTC CGATTTCGAG GCGCTGATGG GCGGCCGCCG GACGGGATGG CGGGCGCAGG GAACGGCTTG A
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Protein sequence | MKHWVKTTLR RSPALRALAL RGSALFKSLA CAEPGLYTLC YHQVPEAQQD RFAAQLRHLG RYGDFIDADG AAERLAAGWP ARDRAFLVTF DDGYADTFEV ARPVLRALGI PGIVFLISDW IDAPPSTPPG LDRATSLSPS GRLYMRRAEI AAWCADGLDI GSHTATHQRL SRLDRTRVAD EITRSRRDLA ALTGREIRHF ACPWGVAGHD FDPEHDPALA LESGYRTFFT TRRGRALSEA DLPAMPRHVV EPHWPVSDFE ALMGGRRTGW RAQGTA
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