Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4554 |
Symbol | |
ID | 5835229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 5085320 |
End bp | 5085733 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641370348 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001641993 |
Protein GI | 163853950 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4101] Predicted mannose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0071761 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCCGGCA CGGGCGCGGC GCTCTGCCGG GTGGTGCGGC CCGGCAAGGC CTTCATCGGC AAGCAAGGAT TGTCCTACGC GCCCGGCATC TCGGCGGAAA CGGCGGGTGC GACGGGCCTT CACCTGCAAA TGGTGACGAT CCCGCCCGGA GCGCGGGCTA AGGCCCATAG GCACGAGGGC CACGAGACCG CGATCTACGC GCTCACCGGC ACCTCCTGCA CATGGTGGGG CGAGCGGCTG GAGCACCACA CCGAGCTGCG CCCCGGCGAG TACTTTTACA TTCCGGCTGG CGTGCCGCAC CTGCCCTACA ATCCGAGCCC GACCGAGCCG TGCACGGCGC TCATCGCCCG CACCGATCCG AACGAGCAGG AAAGCGTGGT GCTGCTGCCG GATCTCGACG GGATACATCC GTGA
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Protein sequence | MSGTGAALCR VVRPGKAFIG KQGLSYAPGI SAETAGATGL HLQMVTIPPG ARAKAHRHEG HETAIYALTG TSCTWWGERL EHHTELRPGE YFYIPAGVPH LPYNPSPTEP CTALIARTDP NEQESVVLLP DLDGIHP
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