Gene Mext_4554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4554 
Symbol 
ID5835229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp5085320 
End bp5085733 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content69% 
IMG OID641370348 
Productcupin 2 domain-containing protein 
Protein accessionYP_001641993 
Protein GI163853950 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4101] Predicted mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0071761 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCCGGCA CGGGCGCGGC GCTCTGCCGG GTGGTGCGGC CCGGCAAGGC CTTCATCGGC 
AAGCAAGGAT TGTCCTACGC GCCCGGCATC TCGGCGGAAA CGGCGGGTGC GACGGGCCTT
CACCTGCAAA TGGTGACGAT CCCGCCCGGA GCGCGGGCTA AGGCCCATAG GCACGAGGGC
CACGAGACCG CGATCTACGC GCTCACCGGC ACCTCCTGCA CATGGTGGGG CGAGCGGCTG
GAGCACCACA CCGAGCTGCG CCCCGGCGAG TACTTTTACA TTCCGGCTGG CGTGCCGCAC
CTGCCCTACA ATCCGAGCCC GACCGAGCCG TGCACGGCGC TCATCGCCCG CACCGATCCG
AACGAGCAGG AAAGCGTGGT GCTGCTGCCG GATCTCGACG GGATACATCC GTGA
 
Protein sequence
MSGTGAALCR VVRPGKAFIG KQGLSYAPGI SAETAGATGL HLQMVTIPPG ARAKAHRHEG 
HETAIYALTG TSCTWWGERL EHHTELRPGE YFYIPAGVPH LPYNPSPTEP CTALIARTDP
NEQESVVLLP DLDGIHP