Gene Mext_4543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4543 
Symbol 
ID5832114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp5076925 
End bp5077209 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content73% 
IMG OID641370337 
ProductSH3 type 3 domain-containing protein 
Protein accessionYP_001641982 
Protein GI163853939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.780585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.146973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCT CCCTGCCCCG CCTCGCCTTT GCCCTGCTGC TCGCAGGCGG CGGTTCCGCG 
TGGGGCGCCG AGACTTTCCG GGTCGAGGGC CTGCCGCGGG ACGACAGCCT GACGATCCGC
GAAACGCCGG ATGCGGGGGC GCCGGCCCTC GGACAGATCC CGGTCGGGCG CCGGGTGCTC
GGCTTCGGCT GCACCAACGA GACGCCGAGC GGGCTGACAT GGTGCCGGGT GAAGTTCGAC
CGCACTCTCG GCTGGGCGCG GCGGCGCTAC CTGACGCCGG ATTGA
 
Protein sequence
MSRSLPRLAF ALLLAGGGSA WGAETFRVEG LPRDDSLTIR ETPDAGAPAL GQIPVGRRVL 
GFGCTNETPS GLTWCRVKFD RTLGWARRRY LTPD