| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4518 |
|---|
| Symbol | |
|---|
| ID | 5834717 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 5046347 |
|---|
| End bp | 5047306 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641370312 |
|---|
| Product | LysR substrate-binding |
|---|
| Protein accession | YP_001641957 |
|---|
| Protein GI | 163853914 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCG ATCACGTGCA TCTATCCCGG CTCGATCTCA ACCTGCTCGT CGCCCTCGAC
GCGCTGCTGA CGGAGCGCAG CGTGACCCGC GCGGCCGGAC GGATCGGCAT CAGCCAGTCG
GCGATGAGCC ATGCCCTGGC GCGGCTGCGC ACCGCCTTCT CGGATGAGCT GCTGACGCGG
GGGCCCGACG GAATGCGGCC GACGCCGCGC GCGCTGGCGC TCCTGGGGCC GGTGCAGGCG
GCACTGTCCC AGATTCAGGA GATCACGACG CCGCCGGATG CCTTCGATCC GGCCACGGCC
GACCTCACCT TCACCCTCGG CATCCCGGAC TCGACCGAGG TGCTCCTGAT GCCGACCCTC
ATCGCGCATC TGCAGGCGGT GGCACCGGGG GTGAAGCTCC TGCTGCACAC GGTCGATCGG
CATCGCATCC TCGACGACCT CGATACGGGG CGGGTCGATC TCGGTATCGG CGTGTTCGAG
CAGGGCCAGA CGCATCACAA GCGACGGATT CTCAACAAGG AGAGCTACCT CTGCATCTTC
AACGCCGAGT TGGTCGGGGT GACGGCGCCG ATCTCGCTCG ACGACTACGT GCGGCTCCCG
CACCTGCTCA CGAGCCTGGT CGAGAGCGCC CACGGCGTGG TGGACGACGC GCTGGCCAAG
ATCGGCCGCA AGCGCGTCAT CGCGCTGACC TCGCCGCGGT TCTCGGTGAT GCCCTTCGTG
GTGCGACAGG CCCCCGTCAT CGCCACGATG CACGCCCGGC TCGCGCGCTT CTTCGCCGAT
AGCATGGGCC TGACCGTCAG CCCGGCACCG ATCACGCTGC CGGACGTCTC CATCTCGATG
ATCTGGCACA CGTCCAACGA CGCCATTCCC AGTCAGCGCT GGCTGCGAGA GACCATCATA
AAGCTTCGCA AATCCGATCC CCGGCCGCCG ACCGACGGCT CTCACACGAC ATCCGATTGA
|
|---|
| Protein sequence | MRIDHVHLSR LDLNLLVALD ALLTERSVTR AAGRIGISQS AMSHALARLR TAFSDELLTR
GPDGMRPTPR ALALLGPVQA ALSQIQEITT PPDAFDPATA DLTFTLGIPD STEVLLMPTL
IAHLQAVAPG VKLLLHTVDR HRILDDLDTG RVDLGIGVFE QGQTHHKRRI LNKESYLCIF
NAELVGVTAP ISLDDYVRLP HLLTSLVESA HGVVDDALAK IGRKRVIALT SPRFSVMPFV
VRQAPVIATM HARLARFFAD SMGLTVSPAP ITLPDVSISM IWHTSNDAIP SQRWLRETII
KLRKSDPRPP TDGSHTTSD
|
|---|
| |