| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4501 |
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| Symbol | |
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| ID | 5832226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 5020725 |
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| End bp | 5022800 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641370294 |
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| Product | transketolase |
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| Protein accession | YP_001641940 |
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| Protein GI | 163853897 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.58871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGTG CAGACACGAG CCCGAAGGCG GCCCTGAGCC AGGGCGACAA GCTCGCGATC
GACACGATCC GGACGCTCGC GATCGACGCG GTGCAGAAGG CCAATTCCGG ACATGCCGGC
GCGCCGATGG CGCTGGCGCC CGTCGCCTAC ACCCTGTGGA ACCGGTATCT GCGCTACGAT
CCGGCCCATC CGCACTGGCC GAACCGCGAC CGCTTCGTGC TCTCGGCCGG TCACGCCTCG
ATGCTGCTCT ACGGGCTGCT GCACTTGGCC CGCGTGGCCG AGAAGGACGG CGGCAATTCC
CCCGCCATCT CGCTGGACGA CATCAAGAAA TTCCGGCAGC TCGACAGCCG CACGCCGGGC
CATCCGGAAT ACCACTTCAC CACCGGCGTC GAGACCACCA CCGGGCCGCT GGGCCAGGGC
GTGGCGAACT CCGTCGGCAT GGCGATGGGC GGCCGCTTCA AGGGCGAGCG CCTGAACCGG
CCCGACCTGC CGCTGTTCGA CTACAACGTC TACGCCATCT GCTCGGACGG CGACCTGATG
GAGGGCGTCA GCCAGGAGGC CGCGTCGATC GCCGGGCACC TGCGCCTGTC GAACTTGTGC
TGGATCTACG ACAACAACAC CATCACCATC GAGGGCCACA CCGAACTCGC CTTCTCGGAA
GAGGTCGCCG CCCGCTTCCT CGCCTATGGC TGGCAGGTGC TGCGGGTGGC CGATGCCAAC
GACACCCACG CCATCGCCTC GGCGCTCGAG ACCTTCCTGC AATCGAGCGA CCGCCCGACG
CTGATCATCG TCAACTCGAT CATCGGCTAC GGCGCGCCGA CCAAGCAGAA CACGTCGAAG
GCTCATTCCG ACGCGCTCGG CCCCGACGAG GTGAAAGGCG CCAAGCGCGC CTATGGCTGG
CCGGAGGATT CCGAGTTCCT GGTGCCGGAC GGCGTCTACG ACACCTTCGC CGACGGCATC
GGCAAGCGCG GCGCCGCGCT CTACAGTCAG TGGCAGGGCT TCTTCGAGGC CGCCAAGGCG
GCGGATGCGG AGCATGCCGA GGAACTGTCG GCCTTCCTCG AAGGCCGTCT GCCGGAGGGC
TGGGACCGCG ACATCCCGGT CTTCGAGGCC GACGCCAAGG GGCTCGCGAC GCGCGAATCC
TCGGGCAAGG TGCTCAACGC CATCGCCCAG CACGTGCCGT TCCTGCTCGG CGGCTCGGCC
GATCTGGCGC CGTCCAACAA GTCGAACCTC ACCTTCGAGG GCGCGGGCTC GCTGACCCCG
TTCGAGCCGG GCGGGCGCAA CATCCATTTC GGCGTGCGCG AGCATGCCAT GGGCTCGATC
GTGAACGGGC TCGGGCTCGT GGGCCTGCGC GCCTACGGCG CGACCTTCCT CGTCTTCGCC
GACTACATGC GGCCGCCGAT CCGGCTCGCC TCGCTGATGG AGCTGCCGGT CTTCCATATC
TTCACCCACG ACTCGATCGG CGTGGGCGAG GACGGGCCGA CCCACCAGCC GGTGGAGCAG
ATCCTCTCAC TGCGCTGCAT CCCCGGTCTC CTGACCCTGC GCCCGGCCGA CGCCAACGAG
GTGGCCGAGG CCTACCGGGT GATCTTCTCC CTAAAAAATC AGCCGGCGGT GCTGGCCCTG
TCGCGCCAGC CGCTCCCGAC CTTCGACCGT TCGAAATACG CCCCCGCCTC CGGCACCGCG
AAGGGTGCCT ACGTGCTCGC CGATAGCGAG GGCACGCCGG ACGTGATCCT GATCGGCACG
GGCTCCGAGG TGCAGCTCTG CGTCGGCGCC TACGAGACCC TGAAGGGCGA GGGCGTGAAG
GCGCGCGTCG TCTCGATGCC GTCTTGGGAG CTGTTCGAGC GCCAGGACGA GGCCTACCGC
AACAGCGTCC TGCCGCCGGA GGTTCTGGCG CGCGTGGCCG TGGAGCAGGG CAGCGTGATC
GGCTGGGACC GCTACGCCGG CTCCTCGGGC TCGATCGTCG GCATGCATAC CTTCGGCGCC
TCGGCTCCGA TCAAGGATCT GCTCGGCAAG TTCGGCTTCA CCGCCGAGAA GGTGATCGAA
GCGGCCCGCG CGCAGGCGGC CAAGCACAAG AAGTAG
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| Protein sequence | MSGADTSPKA ALSQGDKLAI DTIRTLAIDA VQKANSGHAG APMALAPVAY TLWNRYLRYD
PAHPHWPNRD RFVLSAGHAS MLLYGLLHLA RVAEKDGGNS PAISLDDIKK FRQLDSRTPG
HPEYHFTTGV ETTTGPLGQG VANSVGMAMG GRFKGERLNR PDLPLFDYNV YAICSDGDLM
EGVSQEAASI AGHLRLSNLC WIYDNNTITI EGHTELAFSE EVAARFLAYG WQVLRVADAN
DTHAIASALE TFLQSSDRPT LIIVNSIIGY GAPTKQNTSK AHSDALGPDE VKGAKRAYGW
PEDSEFLVPD GVYDTFADGI GKRGAALYSQ WQGFFEAAKA ADAEHAEELS AFLEGRLPEG
WDRDIPVFEA DAKGLATRES SGKVLNAIAQ HVPFLLGGSA DLAPSNKSNL TFEGAGSLTP
FEPGGRNIHF GVREHAMGSI VNGLGLVGLR AYGATFLVFA DYMRPPIRLA SLMELPVFHI
FTHDSIGVGE DGPTHQPVEQ ILSLRCIPGL LTLRPADANE VAEAYRVIFS LKNQPAVLAL
SRQPLPTFDR SKYAPASGTA KGAYVLADSE GTPDVILIGT GSEVQLCVGA YETLKGEGVK
ARVVSMPSWE LFERQDEAYR NSVLPPEVLA RVAVEQGSVI GWDRYAGSSG SIVGMHTFGA
SAPIKDLLGK FGFTAEKVIE AARAQAAKHK K
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