| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4497 |
|---|
| Symbol | |
|---|
| ID | 5832018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 5016120 |
|---|
| End bp | 5017136 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641370290 |
|---|
| Product | putative nitrate transport protein |
|---|
| Protein accession | YP_001641936 |
|---|
| Protein GI | 163853893 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATCA GACTCGGATA CGTCCCCCTC ACCGACGCCG CCCCCGTGAT CGCGGCGGCG
GAACTGGGCT TCGCACGCGC AGAGGGGCTC GAGATCGAAC TCGCGCGCGA GCCCTCCTGG
GCGACCCTGC GCGACCGGCT GGCGCTCGGC CATCTCGACG CCGCGCACAT GCTCGGGCCG
CTCGCCATCG CCAGCGCGCT CGGGCTCTCG GGGCCGCAGG CCCGTCTGAG CGTGCCGATG
GCGCTCGGCC TCAACGGCAA CGCCGTGACC GTCTCGAACG CGCTCTGGGC GGCGATGGCG
CCGGAGAGCG ACGGACTCGG TGACGTGGCC GCGGCTTTCT CGGCGGTCGC CCGCGCGCGG
GCCGGGGAGG GGCGTCCGCT CGTCATCGGC ACGGTGCATC CCTTCTCCAG CCATTCCTAC
CAGCTCCGCC TGTTCGCCGG CCTGAGCGGG CTCGACCTCG ACGCGACGGT GCGGTTGGTC
GTGGTGCCGC CGCCGGAGAC GGTGGATGCG CTCCGGCGCG GGCGGATCGA CGGATTCTGC
GTCGGCGCCC CCTGGAACAG CGTCGCGGTC GCCGCCGGCC TCGGCCGGAT CGCGGCACTC
GGCTGCGAGA TCGCGCCCGA CTGCCCGGAG AAGGTGCTGG CGCTGCCCGC GGAGGGGGCC
GACTTCACGG CACCTTTGGT CAGGGCCGTC CATCGGGCCG GACTTTGGTG CGCCGCCCCC
GAGAACCACG AGGCCCTGAG CCGCATGCTC GCCGAACGGG CAGAACTCGA CGCGGATGCC
GCGCTTCTGG CGCGCACGCT CAGCGGCGCG CTGATCGTGG ATCGGGACGG AACCGAGCGG
GCGAACCCGG ACTATCTGCG CCTCGACGCG GCGACCCACC GGCCGGACCC GGAGCATGCC
CGGTGGCTGG TGGCGCAGAT GGCCGCCTGC GGGCAGGTGG CGTCCGGCGA CGACGCGGCG
GACCGGGCGG CAGCGCTCTA CCGGCCCGAC CTCTTCGCCG CGGCCATCGG CGGCTGA
|
|---|
| Protein sequence | MRIRLGYVPL TDAAPVIAAA ELGFARAEGL EIELAREPSW ATLRDRLALG HLDAAHMLGP
LAIASALGLS GPQARLSVPM ALGLNGNAVT VSNALWAAMA PESDGLGDVA AAFSAVARAR
AGEGRPLVIG TVHPFSSHSY QLRLFAGLSG LDLDATVRLV VVPPPETVDA LRRGRIDGFC
VGAPWNSVAV AAGLGRIAAL GCEIAPDCPE KVLALPAEGA DFTAPLVRAV HRAGLWCAAP
ENHEALSRML AERAELDADA ALLARTLSGA LIVDRDGTER ANPDYLRLDA ATHRPDPEHA
RWLVAQMAAC GQVASGDDAA DRAAALYRPD LFAAAIGG
|
|---|
| |