Gene Mext_4454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4454 
Symbol 
ID5833684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4961091 
End bp4961774 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content69% 
IMG OID641370247 
ProductTENA/THI-4 domain-containing protein 
Protein accessionYP_001641893 
Protein GI163853850 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.592634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCGAAC ACCTCTCAGC CGGGCGCTTC TCGCAGGAAG CCTGGGCCCG CAATCTCGCG 
GCCTACGAGG CGATCCGCAC GATGCCGTTC AACGCGGAAC TGGCGGACGG CTCCTTGAGC
CGCGAGCGCT TCCGCCGCTA CATCGTGCAG GACGCGCATT ACCTCATCGG GTTCGGCCGG
GCGCTGGCGC TCGCCGCCGC CAAGGCGCCG CATCCCGACC GGATCGTGCA GTTCGCCCGC
GGCGCTGAGA CCGCCATCGT GGTCGAGCGC GCGCTGCATG GCGGCTTCTT CCAAGAATAC
GGCATCGACG CCGGCACCTT TGCCGCAACG CCCCTCTCGC CCGCTTGCGA CCATTACGTC
GCGTGGCTGA TCGCGACGGC CTATGCCGAG CCCTACGAAG TCGTGCTCGG CGCGCTTCTG
CCCTGTTTCT GGATCTACGC CGAGGTCGGC CGCGACATCT TCGCCCGCGC CAAGCCCGAC
AATCCCTACC GCGCCTGGAT CGACACCTAT GCCGGCGAGG AGTTCGGCGA GGCGGTGGCC
GCGATGATCG CCGCGACCGA CGAGGCGGCC GCCGACGCCT CCCCTGCCCT GCGCGCCCGG
ATGCACGCGG CCTACACCCA CGCGACCCGC CTCGAATTCG GCTTCTGGGA CAGCGCTTAT
CGGGATCTCA CCTGGGCGCT GTGA
 
Protein sequence
MAEHLSAGRF SQEAWARNLA AYEAIRTMPF NAELADGSLS RERFRRYIVQ DAHYLIGFGR 
ALALAAAKAP HPDRIVQFAR GAETAIVVER ALHGGFFQEY GIDAGTFAAT PLSPACDHYV
AWLIATAYAE PYEVVLGALL PCFWIYAEVG RDIFARAKPD NPYRAWIDTY AGEEFGEAVA
AMIAATDEAA ADASPALRAR MHAAYTHATR LEFGFWDSAY RDLTWAL