Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4450 |
Symbol | |
ID | 5834113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 4955728 |
End bp | 4957434 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641370243 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001641889 |
Protein GI | 163853846 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.181916 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCATTTC CGTCTCTGCC CTCCCCCCTG GCGCGGGCGC TCACCGAGCG CAACTATGCC GAGCCGACAC CCGTCCAGCA GGCGGTGCTC GATGCCGTCC CAGAGCGCGA CCTGCTCGTT TCGGCTCAGA CCGGATCGGG TAAGACCGTC GCCTTCGGTC TCGCCATCGC CGGTACGCTG CTCGGCGAGG ACGAAACGCT GCCGCCGCCC GGCGCGCCGC TGGCGCTCGT CATCGCTCCG ACCCGTGAGC TGGCACTCCA GGTGCAGCGG GAGCTGACCT GGCTCTACGC GCAGACCGGC GCGCGCATCG TCCCTTGCGT CGGCGGCATG GATCCGCGCC GCGAGGCCCG CGCGCTGGAG GCCGGCGTCC ACATCGTCGT CGGCACGCCG GGGCGCCTGC GCGACCACAT GGAGCGCGGC CGGCTCGTCA CCGAAGGTCT TCGCGCCGTC ATCCTCGACG AGGCCGACGA GATGCTCGAC ATGGGCTTTC GCGAGGATCT CGAATTCATC CTGGCATCGA CCCCGAAGGA CCGGCGCACC CTGCTGTTCT CGGCGACCCT GCCGAAGGCC ATCGTCGCAC TCGCCGAGAG CTACCAGCGC GACGCCCTGC GCCTCGCGGT CGCCGGCGAG ACCCGCGGCC ATGCCGACAT CGTCTACCGC GCGGTGCGGG TGATGCCGCG CGAGGTCGAG CACGCCGTCG TCAACATTCT GCGCTACGTC GATGCGCCGG TCGCGATCGT GTTCTGCAAC ACCCGTGACG GCGTGCGCCA TCTCCAGGCC TCGCTGACCG AACGCGGCTT CTCCGCCGTG GCGCTCTCGG GCGAACTCGG CCAGGGCGAG CGCAACGCCG CGCTCCAGGC CCTGCGCGAC GGCCGCGCCC GCGTCTGCGT CGCCACCGAC GTCGCCGCCC GCGGCATCGA CCTGCCGGGC CTCGACCTCG TCATCCACGC CGACCTTCCG CACGATGCCG AGGTGATGCA GCACCGCTCC GGCCGCACCG GCCGCGCCGG CCGCAAGGGG ACGAGCGTCG TGCTCGTGCC GCCGGCCAAG CGGCGGCGGG CCGAGCAGAT GTTCGCCATC GCCAAGGTCA GCCCCGATTG GAGCGGCCCG CCGAACGCGG ACGAGATCCG CATCCTCGAC CGCGAGCGGA TGATGTCCGA TCCGCTGCTC GCCGAGCCCG AGACGGAAGA GGACCGCGAG TGGGAGCGGG AATGGGCCGA GGCGCTGATG GAGCGCTGCC CGCCCGAGCG TCTCGCCGCG GCCTTCGCCC GGCTCTACCG CTCGCGCATC CCCGTGCCGG AGGAGGTGAG CGATCCGGCC TACGAGACCA GCCGGCGTCC GGATTCCCGC AGCGGTGTGC CGGTCGGTGC GTCGCGGGTC GGTGACGACG AGCCGGCGGC GTGGTTCCGG CTCAATCTCG GCCGCCGCGA CCGGGCCGAA CCGCGCCGCC TTCTGCCGAT GCTGACTCGC CGCGGCCAGA TCGGGCGCGG CGATATCGGC TCCATCCGGA TCTTCGACAA CGAGACGACC TTCGAGGTCC GCGCCAGCGC GGCGGACGAC TTCGCCGCCT CTTTTGCCCG GCGTGGGCCC GCCGATGTCC GCGTCGAGCG GATGCAGGGG GATGGACCGG CCGCCGCCAA GGCACCGAAG AGCCCCCGCG CCCAGCGCCA TCGCCGCGAG GCGACCAAAA CCGGCCGGGG CGGCTGA
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Protein sequence | MPFPSLPSPL ARALTERNYA EPTPVQQAVL DAVPERDLLV SAQTGSGKTV AFGLAIAGTL LGEDETLPPP GAPLALVIAP TRELALQVQR ELTWLYAQTG ARIVPCVGGM DPRREARALE AGVHIVVGTP GRLRDHMERG RLVTEGLRAV ILDEADEMLD MGFREDLEFI LASTPKDRRT LLFSATLPKA IVALAESYQR DALRLAVAGE TRGHADIVYR AVRVMPREVE HAVVNILRYV DAPVAIVFCN TRDGVRHLQA SLTERGFSAV ALSGELGQGE RNAALQALRD GRARVCVATD VAARGIDLPG LDLVIHADLP HDAEVMQHRS GRTGRAGRKG TSVVLVPPAK RRRAEQMFAI AKVSPDWSGP PNADEIRILD RERMMSDPLL AEPETEEDRE WEREWAEALM ERCPPERLAA AFARLYRSRI PVPEEVSDPA YETSRRPDSR SGVPVGASRV GDDEPAAWFR LNLGRRDRAE PRRLLPMLTR RGQIGRGDIG SIRIFDNETT FEVRASAADD FAASFARRGP ADVRVERMQG DGPAAAKAPK SPRAQRHRRE ATKTGRGG
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