Gene Mext_4450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4450 
Symbol 
ID5834113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4955728 
End bp4957434 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content73% 
IMG OID641370243 
ProductDEAD/DEAH box helicase domain-containing protein 
Protein accessionYP_001641889 
Protein GI163853846 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.181916 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCATTTC CGTCTCTGCC CTCCCCCCTG GCGCGGGCGC TCACCGAGCG CAACTATGCC 
GAGCCGACAC CCGTCCAGCA GGCGGTGCTC GATGCCGTCC CAGAGCGCGA CCTGCTCGTT
TCGGCTCAGA CCGGATCGGG TAAGACCGTC GCCTTCGGTC TCGCCATCGC CGGTACGCTG
CTCGGCGAGG ACGAAACGCT GCCGCCGCCC GGCGCGCCGC TGGCGCTCGT CATCGCTCCG
ACCCGTGAGC TGGCACTCCA GGTGCAGCGG GAGCTGACCT GGCTCTACGC GCAGACCGGC
GCGCGCATCG TCCCTTGCGT CGGCGGCATG GATCCGCGCC GCGAGGCCCG CGCGCTGGAG
GCCGGCGTCC ACATCGTCGT CGGCACGCCG GGGCGCCTGC GCGACCACAT GGAGCGCGGC
CGGCTCGTCA CCGAAGGTCT TCGCGCCGTC ATCCTCGACG AGGCCGACGA GATGCTCGAC
ATGGGCTTTC GCGAGGATCT CGAATTCATC CTGGCATCGA CCCCGAAGGA CCGGCGCACC
CTGCTGTTCT CGGCGACCCT GCCGAAGGCC ATCGTCGCAC TCGCCGAGAG CTACCAGCGC
GACGCCCTGC GCCTCGCGGT CGCCGGCGAG ACCCGCGGCC ATGCCGACAT CGTCTACCGC
GCGGTGCGGG TGATGCCGCG CGAGGTCGAG CACGCCGTCG TCAACATTCT GCGCTACGTC
GATGCGCCGG TCGCGATCGT GTTCTGCAAC ACCCGTGACG GCGTGCGCCA TCTCCAGGCC
TCGCTGACCG AACGCGGCTT CTCCGCCGTG GCGCTCTCGG GCGAACTCGG CCAGGGCGAG
CGCAACGCCG CGCTCCAGGC CCTGCGCGAC GGCCGCGCCC GCGTCTGCGT CGCCACCGAC
GTCGCCGCCC GCGGCATCGA CCTGCCGGGC CTCGACCTCG TCATCCACGC CGACCTTCCG
CACGATGCCG AGGTGATGCA GCACCGCTCC GGCCGCACCG GCCGCGCCGG CCGCAAGGGG
ACGAGCGTCG TGCTCGTGCC GCCGGCCAAG CGGCGGCGGG CCGAGCAGAT GTTCGCCATC
GCCAAGGTCA GCCCCGATTG GAGCGGCCCG CCGAACGCGG ACGAGATCCG CATCCTCGAC
CGCGAGCGGA TGATGTCCGA TCCGCTGCTC GCCGAGCCCG AGACGGAAGA GGACCGCGAG
TGGGAGCGGG AATGGGCCGA GGCGCTGATG GAGCGCTGCC CGCCCGAGCG TCTCGCCGCG
GCCTTCGCCC GGCTCTACCG CTCGCGCATC CCCGTGCCGG AGGAGGTGAG CGATCCGGCC
TACGAGACCA GCCGGCGTCC GGATTCCCGC AGCGGTGTGC CGGTCGGTGC GTCGCGGGTC
GGTGACGACG AGCCGGCGGC GTGGTTCCGG CTCAATCTCG GCCGCCGCGA CCGGGCCGAA
CCGCGCCGCC TTCTGCCGAT GCTGACTCGC CGCGGCCAGA TCGGGCGCGG CGATATCGGC
TCCATCCGGA TCTTCGACAA CGAGACGACC TTCGAGGTCC GCGCCAGCGC GGCGGACGAC
TTCGCCGCCT CTTTTGCCCG GCGTGGGCCC GCCGATGTCC GCGTCGAGCG GATGCAGGGG
GATGGACCGG CCGCCGCCAA GGCACCGAAG AGCCCCCGCG CCCAGCGCCA TCGCCGCGAG
GCGACCAAAA CCGGCCGGGG CGGCTGA
 
Protein sequence
MPFPSLPSPL ARALTERNYA EPTPVQQAVL DAVPERDLLV SAQTGSGKTV AFGLAIAGTL 
LGEDETLPPP GAPLALVIAP TRELALQVQR ELTWLYAQTG ARIVPCVGGM DPRREARALE
AGVHIVVGTP GRLRDHMERG RLVTEGLRAV ILDEADEMLD MGFREDLEFI LASTPKDRRT
LLFSATLPKA IVALAESYQR DALRLAVAGE TRGHADIVYR AVRVMPREVE HAVVNILRYV
DAPVAIVFCN TRDGVRHLQA SLTERGFSAV ALSGELGQGE RNAALQALRD GRARVCVATD
VAARGIDLPG LDLVIHADLP HDAEVMQHRS GRTGRAGRKG TSVVLVPPAK RRRAEQMFAI
AKVSPDWSGP PNADEIRILD RERMMSDPLL AEPETEEDRE WEREWAEALM ERCPPERLAA
AFARLYRSRI PVPEEVSDPA YETSRRPDSR SGVPVGASRV GDDEPAAWFR LNLGRRDRAE
PRRLLPMLTR RGQIGRGDIG SIRIFDNETT FEVRASAADD FAASFARRGP ADVRVERMQG
DGPAAAKAPK SPRAQRHRRE ATKTGRGG