Gene Mext_4402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4402 
Symbol 
ID5830936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4897025 
End bp4898242 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content68% 
IMG OID641370195 
Productbeta-lactamase 
Protein accessionYP_001641841 
Protein GI163853798 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.254761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTTG AAACCGATCC CCGAGACGTC GGCCTCTGTC CCGACCGCCT CGAACGGATC 
GATGCCTGGA TGCGGGGCTA CGTCGAGAGC GGGCGCCTGG CCGGCCTCTC GGTGAGCGTG
CTGCGGGGTG GCCAGACCGC CTTCTTCCGC GCCCACGGCC ATGCCGACCT CGCGCGGGAC
AGGCCGTTCG CCGCCGACAC CATCACCCGC ATCTACTCGA TGACGAAGCC GCTGACCTCG
CTCGCGGTGC TGATGCTCTA CGAGGAGGGC CGCTTCCAGC TCGACGATCC GGTCTCTCGC
TTCCTGCCCG AATTCGCGGA GATGCGAGTA GTGACCGGCG GCAACCGGGC CAAGCTCGAG
ACCGAGCCGG CGCTCCGCGC CATCACGATC CGCGACCTCC TCACGCATAC CAGCGGGCTG
ACCTACGGCT TCATGGAGGC GACGCTCGTC GATGCGCTCT ACCGCCAGAA CGAGATCGAT
TTCCAGACCT CGTCGCTGCC GCTCGGCGAC CTCGTGGCCA AGCTCGCGGA GCAGCCGCTA
CTGGCCCAGC CGGGGGCGGA GTGGAACTAC TCGGTCGCCA CCGACGTGCT CGGCCATCTC
GTGGCGGTGG TGTCAGGGAT CGACTTCGCC GAGTTCATGC GCACACGCAT CCTGCACCCG
CTCGGCATGG ACGACACCGA CTTCTTCGTG CCGGAAGAGA AGCAGGCGCG CTTTGCGGCG
AACTACGCCT TCGACCGCGC GGGCAAGCTG CGCCTCTACG ACGACAGCGT CGGCAGCCGC
TTCCTGGCGC CGCCGCCGCT GGCCTCGGGC GGGGGCGGGC TCGTCTCCAC GGCCGTCGAC
TACCTGCGCT TCTGCCGGAT GATCCTCAAT CTCGGCGAAC TCGACGGCGT GCGGCTTCTG
GGGCGCAAGA CCGTCGAGCT CATGCTGATG AACCACCTGC CCGGCGATCT CGCCGCCATG
GGCCAGCCGC GCTTCGCCGA ATCGTCCTAT GCCGGCATCG GTTTCGGGCT CGGGGTTTCG
GTGATGCTCG ATCCGGCCCG CGCCCAGATC CTGGGTACGC CGGGGGAGGT GTCCTGGGGC
GGGGTGGCGA GCACGTCGTT CTGGATCGAT CCGGACGAGG ACATGGCGGT GCTATTGCTC
ACCCAGCTCG TCCCCTCCTC CGCCCTGCCC CTGCGCCGCG AATTGCGGGT GCTGACCTAC
GCCGCCATCG AGAGCTGA
 
Protein sequence
MQVETDPRDV GLCPDRLERI DAWMRGYVES GRLAGLSVSV LRGGQTAFFR AHGHADLARD 
RPFAADTITR IYSMTKPLTS LAVLMLYEEG RFQLDDPVSR FLPEFAEMRV VTGGNRAKLE
TEPALRAITI RDLLTHTSGL TYGFMEATLV DALYRQNEID FQTSSLPLGD LVAKLAEQPL
LAQPGAEWNY SVATDVLGHL VAVVSGIDFA EFMRTRILHP LGMDDTDFFV PEEKQARFAA
NYAFDRAGKL RLYDDSVGSR FLAPPPLASG GGGLVSTAVD YLRFCRMILN LGELDGVRLL
GRKTVELMLM NHLPGDLAAM GQPRFAESSY AGIGFGLGVS VMLDPARAQI LGTPGEVSWG
GVASTSFWID PDEDMAVLLL TQLVPSSALP LRRELRVLTY AAIES