Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4402 |
Symbol | |
ID | 5830936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 4897025 |
End bp | 4898242 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641370195 |
Product | beta-lactamase |
Protein accession | YP_001641841 |
Protein GI | 163853798 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.254761 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGTTG AAACCGATCC CCGAGACGTC GGCCTCTGTC CCGACCGCCT CGAACGGATC GATGCCTGGA TGCGGGGCTA CGTCGAGAGC GGGCGCCTGG CCGGCCTCTC GGTGAGCGTG CTGCGGGGTG GCCAGACCGC CTTCTTCCGC GCCCACGGCC ATGCCGACCT CGCGCGGGAC AGGCCGTTCG CCGCCGACAC CATCACCCGC ATCTACTCGA TGACGAAGCC GCTGACCTCG CTCGCGGTGC TGATGCTCTA CGAGGAGGGC CGCTTCCAGC TCGACGATCC GGTCTCTCGC TTCCTGCCCG AATTCGCGGA GATGCGAGTA GTGACCGGCG GCAACCGGGC CAAGCTCGAG ACCGAGCCGG CGCTCCGCGC CATCACGATC CGCGACCTCC TCACGCATAC CAGCGGGCTG ACCTACGGCT TCATGGAGGC GACGCTCGTC GATGCGCTCT ACCGCCAGAA CGAGATCGAT TTCCAGACCT CGTCGCTGCC GCTCGGCGAC CTCGTGGCCA AGCTCGCGGA GCAGCCGCTA CTGGCCCAGC CGGGGGCGGA GTGGAACTAC TCGGTCGCCA CCGACGTGCT CGGCCATCTC GTGGCGGTGG TGTCAGGGAT CGACTTCGCC GAGTTCATGC GCACACGCAT CCTGCACCCG CTCGGCATGG ACGACACCGA CTTCTTCGTG CCGGAAGAGA AGCAGGCGCG CTTTGCGGCG AACTACGCCT TCGACCGCGC GGGCAAGCTG CGCCTCTACG ACGACAGCGT CGGCAGCCGC TTCCTGGCGC CGCCGCCGCT GGCCTCGGGC GGGGGCGGGC TCGTCTCCAC GGCCGTCGAC TACCTGCGCT TCTGCCGGAT GATCCTCAAT CTCGGCGAAC TCGACGGCGT GCGGCTTCTG GGGCGCAAGA CCGTCGAGCT CATGCTGATG AACCACCTGC CCGGCGATCT CGCCGCCATG GGCCAGCCGC GCTTCGCCGA ATCGTCCTAT GCCGGCATCG GTTTCGGGCT CGGGGTTTCG GTGATGCTCG ATCCGGCCCG CGCCCAGATC CTGGGTACGC CGGGGGAGGT GTCCTGGGGC GGGGTGGCGA GCACGTCGTT CTGGATCGAT CCGGACGAGG ACATGGCGGT GCTATTGCTC ACCCAGCTCG TCCCCTCCTC CGCCCTGCCC CTGCGCCGCG AATTGCGGGT GCTGACCTAC GCCGCCATCG AGAGCTGA
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Protein sequence | MQVETDPRDV GLCPDRLERI DAWMRGYVES GRLAGLSVSV LRGGQTAFFR AHGHADLARD RPFAADTITR IYSMTKPLTS LAVLMLYEEG RFQLDDPVSR FLPEFAEMRV VTGGNRAKLE TEPALRAITI RDLLTHTSGL TYGFMEATLV DALYRQNEID FQTSSLPLGD LVAKLAEQPL LAQPGAEWNY SVATDVLGHL VAVVSGIDFA EFMRTRILHP LGMDDTDFFV PEEKQARFAA NYAFDRAGKL RLYDDSVGSR FLAPPPLASG GGGLVSTAVD YLRFCRMILN LGELDGVRLL GRKTVELMLM NHLPGDLAAM GQPRFAESSY AGIGFGLGVS VMLDPARAQI LGTPGEVSWG GVASTSFWID PDEDMAVLLL TQLVPSSALP LRRELRVLTY AAIES
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