| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4398 |
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| Symbol | |
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| ID | 5835076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 4892778 |
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| End bp | 4894322 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641370191 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001641837 |
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| Protein GI | 163853794 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0423114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGAAC CGGACGAAGG CCCGACGGTC ACGGCAAGCC CGGAACGCGA CGAGCGCATC
CGGCGCCTGG AGCGGCGCGT CGCCCGCGAG CGGAGCGCCC GCGCCGAGGC CGAGTCCCTC
CTCGAAGCCA AGTCCCGCGA ACTCTACGCC CTCAACCAGC AACTCTCCCG CTTCGCCGCG
GACCTGGAAC TGCGGGTGGA CGAACGCACG CGCGAACTGG CCCTGGCGCG CGAGCGCGCC
GTGGCGCTGG CCGAGCGCGA CCAACTCACC GGTCTGGCCA ACCGCACCCG CTTCGCCCGC
GTCCTCGGTG CCGCCGTCGG CCGGGCGGGC CGCGGGACGG GCAGCGAGCG CTTCGCCCTG
CTCCTGCTCG ACCTCGATCG TTTCAAGGAG ATCAACGACA GCCTGGGCCA CGAGGCCGGA
GACGTGTTCC TCCAGCATGT CGCCCGCCGC CTGAGCGGGA CCGTCGGCCA AGGGGCGGTG
ACGGCGCGCC TGGGCGGCGA CGAATTCGCG GCCATCATTC CGCTCGGCCC CCGCAGCGAT
CTCGCCCGTC TCGGCGAGGC CGTGGTGGCG GAGATCCGCC GGCCTGTCGC CTATCGCGGG
CGGATGCTGG AGGCGTCCGC CTCGCTCGGC ATCGCCGTCT TCCCCGACGA TGCCGCGACG
GGCAGCGACC TTCAGCGCTT CGCCGACATC GCCCTCTACC GCTCGAAGGC AACCCGCGCC
GCCTGGACCC GGTTCGACCC GCGCATGGGC CGGGAGATCG AGGAGCGGCA GGCCCTGGGG
GCCGATCTCG GCGCGGCGAT CCGCTCCGGC GCGATCGAGC CATGGTTCCA GCCGATCGTC
GACGGGGTCA CCCGCCATCC CGTCGGGGCC GAGGCGCTGG CGCGATGGGT TCATCCGCAG
CTCGGCTTCC TCGCTCCGGC TGCCTTCCTC GGTCTCGCCG AAGAGCGCGG GCTGATGCGC
GACCTGTTCG CAGGGATGAT GCGCCGCGCC TGCCCGCCGG CGCGGGACTG GGTCCGGGCG
GGGGCGATCC GCACCCTGTC GGTGAACCTC TCGCCGAGCC AGTTCAAGCT CGGATCGGTC
GCCGACGACG TCATCGCGCT TCTCGCCGAA CTCGACTTCC CACCCGAGGC GTTGACCGTC
GAGATCACCG AGGAGGTGCT GCTGAACGAT CTCGATCGCG CTCGGGTGCA GTTGGAGCGG
CTCGCCGCTC ACGGCGTGCG GATCGCGCTC GACGATTTCG GGGTTGGCTA CTCCAACATC
GGCTATCTTC GCCGGCTGCC GATCCAGACG CTGAAGCTCG ACCGGCTGCT CACCGTGGAC
GTGGCGCAGG AGCACGAGGC CCGCTGCATC CTCGGCGCGA TCGTCCAGAT CGCCCGCGCC
CTCGACCTGC GATTGGTGGC GGAGGGGGTG GAAGATCCCG GCCAGGCCCT CTGGCTCAGC
CATCTCGGCT GCCGCCACCT CCAGGGCTAC CTGTTCGGCC GGCCGATGCC GGCGGAGGCC
TTCGCCGGCT ATCTCGGCTT TGACGGGGCG CGGCGCATCG CCTGA
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| Protein sequence | MPEPDEGPTV TASPERDERI RRLERRVARE RSARAEAESL LEAKSRELYA LNQQLSRFAA
DLELRVDERT RELALARERA VALAERDQLT GLANRTRFAR VLGAAVGRAG RGTGSERFAL
LLLDLDRFKE INDSLGHEAG DVFLQHVARR LSGTVGQGAV TARLGGDEFA AIIPLGPRSD
LARLGEAVVA EIRRPVAYRG RMLEASASLG IAVFPDDAAT GSDLQRFADI ALYRSKATRA
AWTRFDPRMG REIEERQALG ADLGAAIRSG AIEPWFQPIV DGVTRHPVGA EALARWVHPQ
LGFLAPAAFL GLAEERGLMR DLFAGMMRRA CPPARDWVRA GAIRTLSVNL SPSQFKLGSV
ADDVIALLAE LDFPPEALTV EITEEVLLND LDRARVQLER LAAHGVRIAL DDFGVGYSNI
GYLRRLPIQT LKLDRLLTVD VAQEHEARCI LGAIVQIARA LDLRLVAEGV EDPGQALWLS
HLGCRHLQGY LFGRPMPAEA FAGYLGFDGA RRIA
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