Gene Mext_4364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4364 
Symbol 
ID5831126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4855041 
End bp4856657 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content66% 
IMG OID641370157 
Productthioredoxin-disulfide reductase 
Protein accessionYP_001641804 
Protein GI163853761 
COG category[O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms 
COG ID[COG0492] Thioredoxin reductase
[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGA TCGGCCGTGA TCTGCGCGAG ATGCAGCGCA TCCCCTTGGC CCAATCGCAT 
GTCGCCGCGC TTCGGGCGAT CGGAGCCGAG AAGCACTACC CGGCCGGTAC CTTTCTCGTT
CATGCCGGTG ATCCAGCCGA CCGCTTCGTC TATGTCGAGG CCGGCGAGAT CGAGGTGGTC
AACCCTTTCA CAAATGAGCG CCATCTGCCG TCTACCCTCG GACCGACTCA GTTCATGGGC
GAGATCTCAT TCCTGAACGG CGGGGTCTGG TCGATGCCCA TGCGGGCGAG TGCGGATACC
ATCGTCACCG AAGTGCCACG CCCGGAGATG CTGCGACTGA TGTCCGAGGT CCCGGAGATG
TCGGACATCA TCATCACGGT CCTAGCCGCA CGGCGGCGGC GGCAGCTCGA TTCGCACGAC
GGCACCCTGG TGCTCCTCGG CGAGGACGAC GACCGGAGCG TCCGGCGGAT TGCCGAGTTC
GCAAGCCGGA ACCGCCTTCC TTACAGGTCC TATCCGCTGG GCAGCCCGGA GGCAGCGAGC
GTCGCCAGGA GTTGCTCGAT CTCGTCCGAA CGGCCGGCTG TGATCTTCGG ACGGGATATC
GTCGTGACCG AACCGACACC CGCCAAGGTC GCGCGGCTGC TCGGCCTCGA CTACAACCTC
GTCGATGACG AGGCCTTCGA CGTCCTTATC GTGGGCGGCG GCCCGGCCGG GGTGGCAGCG
GGCGTCTATG CGGGCGCGGA GGGGCTTCGC GCGCTGGTCA TCGAGGATGT GGCGATCGGC
GGTCAGGCCG GCACATCGAG CCGGATCGAG AACTATATGG GCTTCCCGAC CGGGATCTCG
GGCGCCGACC TCGTCTGGCG CGGCGAGATC CAGGCGATGA AGTTCGGCAC GCGGTTCGCA
ATGCCGCGGC GCGTGGCGAA GCTGGAACGG CTTGAGGACG GATCGTTCTG TGCAACGTTC
GACAACGGCC GGCGCGTTCG GGGACAGGCC GTCGTTGTCG CGACCGGCGT CCAGTACCGA
AGATTGCCGA TCGAACGCCT CGAGGCGTTC GAGGGTGCAG GCATCTACTA CGCTGCGACG
GAGATCGAGG CACGCTACTG CAGGAATGCC GAGACGATCA TCATCGGCGG CGGCAACTCA
GCCGGCCAGG CGGCGATGTA TCTCAGCCGC TCGGCCCGAC ATGTTCGCCT TCTCGTGCGC
GGGCAATCGC TTGCGACGTC CATGTCGAAC TACCTGTCGA GCCGGCTGGA GGCCGACCCG
GGGATCACGA TCGAGTACGG GGCCGAAGTC ACCGCCCTTC ACGGCGACGA TCACCTCGAT
GCGGTGACGA TTCGCAACGT CGCCGACGGC ACGATGCGCA CGATCTCGAC CTGTGCCGTT
TTCGTCATGG TGGGTGCTGC CCCCAACACC GGCTGGCTCT CGGGGCTCGT CGAACTCGAT
GGCCACGGCT TCGTCCTGAC CGGGGACGCG ATCGGCGCGC GTTCACCCTA TGCGACGTCG
CATCCGGGAA TCTTCGCGGT CGGCGACGTG CGAGCCAACT CCGTCAAGCG TGTCGCAGCC
TCGGTCGGCG AGGGTTCGGT CGTCATCTCC AAGGTGTGGG AGCACGTTCG GACGTAG
 
Protein sequence
METIGRDLRE MQRIPLAQSH VAALRAIGAE KHYPAGTFLV HAGDPADRFV YVEAGEIEVV 
NPFTNERHLP STLGPTQFMG EISFLNGGVW SMPMRASADT IVTEVPRPEM LRLMSEVPEM
SDIIITVLAA RRRRQLDSHD GTLVLLGEDD DRSVRRIAEF ASRNRLPYRS YPLGSPEAAS
VARSCSISSE RPAVIFGRDI VVTEPTPAKV ARLLGLDYNL VDDEAFDVLI VGGGPAGVAA
GVYAGAEGLR ALVIEDVAIG GQAGTSSRIE NYMGFPTGIS GADLVWRGEI QAMKFGTRFA
MPRRVAKLER LEDGSFCATF DNGRRVRGQA VVVATGVQYR RLPIERLEAF EGAGIYYAAT
EIEARYCRNA ETIIIGGGNS AGQAAMYLSR SARHVRLLVR GQSLATSMSN YLSSRLEADP
GITIEYGAEV TALHGDDHLD AVTIRNVADG TMRTISTCAV FVMVGAAPNT GWLSGLVELD
GHGFVLTGDA IGARSPYATS HPGIFAVGDV RANSVKRVAA SVGEGSVVIS KVWEHVRT