Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4360 |
Symbol | |
ID | 5831122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 4852011 |
End bp | 4852613 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641370153 |
Product | regulatory protein TetR |
Protein accession | YP_001641800 |
Protein GI | 163853757 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGCC TCGCTGCACA GACCGACACC CGACAGGAGA TCCTCGACTC CGCCTACGGC CTGGTCGGCG CGAAGGGGTT CTCTGGCGTC GGGCTCAACG AGATCCTAAC CTCGGCTGGT GTGCCAAAGG GGTCATTCTA CCACTACTTC GGCTCCAAGG AGGCTTTCGG TGAGGCACTC TTGGCGGACT ACTTCGAGAG CTATCTCGCC GACCTCGACA CGACACTTGC CGAGCCTGGG CTGAGCCATG CCGAGCGCCT GATGAACTAC TGGCGCAAAT GGCAGGCCAC GCAAGGGGGC ATCGACGACC AGCGCAAATG CCTTGCGGTG AAGCTTGCTG CGGAGGTCTC GGACCTGTCC GAGCCTATGC GGCTCGCCCT TAAGAGCGGC ACTACCGCGA TCATAGAACG GCTGGCGCGA TCCATCGCGG CGGGCGTGGC GGAGGGCTCG CTTACGGTCG ACAGCGAGCC ACAGACAACC GCCGAGGATC TGTATCACGT CTGGCTCGGT GCGAGCTTGA TGGCCAAGAT CGTCCGGACC GACGCCCCAT TCGAGGCTGC CATTGGGACA ACCCGGCGCA TTCTCGGCCT CACGTCACAC TGA
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Protein sequence | MARLAAQTDT RQEILDSAYG LVGAKGFSGV GLNEILTSAG VPKGSFYHYF GSKEAFGEAL LADYFESYLA DLDTTLAEPG LSHAERLMNY WRKWQATQGG IDDQRKCLAV KLAAEVSDLS EPMRLALKSG TTAIIERLAR SIAAGVAEGS LTVDSEPQTT AEDLYHVWLG ASLMAKIVRT DAPFEAAIGT TRRILGLTSH
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