Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4355 |
Symbol | |
ID | 5831574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 4843765 |
End bp | 4845207 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641370147 |
Product | isopropylmalate isomerase large subunit |
Protein accession | YP_001641795 |
Protein GI | 163853752 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCCTT CAACCCGTCA GAATAGCTGC ATCATGACCG CGCCGCGCAC CCTCTACGAC AAGATCTGGG ACGACCACGT CGTCGATGTC GAGCCGGATG GCTCCGCCCT CCTCTACATC GACCGCCACC TCGTGCACGA GGTGACGAGC CCCCAGGCGT TCGAGGGGCT TCGCGTCGCC GGCCGCACGG TGCGCGCGCC GCACAAGACG CTGGCCGTCG TCGATCACAA CGTTCAGACC TCGGACCGCT CCAAGGGCAT CGAGGATCCC GAGAGCCGCA CCCAGCTCGA GGCGCTCGCC GAGAACGTGC GCGACTTCGG CATCGAGTTC TACGATGCCC TCGACCAGCG CCAGGGCATC GTCCACATCA TCGGGCCGGA GCAGGGCTTC ACCCTGCCGG GCCAGACGAT CGTGTGCGGC GATTCCCACA CCTCGACCCA CGGCGCCTTC GGCGCGCTGG CCCACGGCAT CGGCACGTCG GAGGTCGAGC ACGTGCTCGC CACGCAGACG CTGATCCAGC GCAAGGCCAA GAACATGCGG GTGACGGTCG ACGGCACCCT GCCGCGGGGC GTCAGCGCCA AGGACATCGT GCTCGCCATC ATCGGCGAGA TCGGCACCGC CGGCGGCACC GGCCACGTCA TCGAGTATGC CGGCGAGGCA ATCCGCGCCC TCTCGATGGA AGGCCGGATG ACGATCTGCA ACATGTCGAT CGAGGGCGGC GCCCGCGCCG GCATGGTCGC GCCCGACGAG ACCACCTACG CCTACGTCAA CGGCCGGCCG AAGGCGCCGA AGGGCGCGGC GTTCGACGCG GCCCGCCGCT ACTGGGAGAG CCTGGCCACG GACGAAGGCG CGCATTTCGA CCGCGAGATC CGTCTCGACG CCGCCAACCT CCCCCCGCTG GTCTCCTGGG GCACGAGCCC TGAGGACATC GTCTCGATCC TCGGCACGGT GCCCGATCCG GCCCAGATCG CGGATGAGAA CAAGCGCCAG TCCAAGGAGA AGGCGCTGGC CTATATGGGC CTGACGCCGG GAACCCGGAT GACCGACGTC ACCCTCGACC GGGTGTTCAT CGGCTCCTGC ACCAATGGCC GCATCGAGGA TCTGCGGATC GTCGCCAAGA TGGTCGAGGG CCGCAAGGTG CATGACAGCG TCTCGGCGAT GGTGGTGCCG GGCTCCGGAC TGGTGAAGGC GCAGGCCGAA GCCGAGGGGA TCGACCGCAT CCTGAAGGAT GCCGGCTTCG ATTGGCGCGA GCCTGGCTGC TCGATGTGCC TCGGCATGAA CCCGGACAAG CTGCGGCCGG GCGAGCGCTG CGCCTCGACC TCCAACCGCA ACTTCGAGGG CCGCCAGGGC CCGCGCGGCC GCACCCACCT CGTCTCCCCG GCAATGGCGG CCGCCGCAGC GGTGGCTGGC CGCTTCGTCG ACATCCGCGA GTGGCGCGGC TGA
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Protein sequence | MEPSTRQNSC IMTAPRTLYD KIWDDHVVDV EPDGSALLYI DRHLVHEVTS PQAFEGLRVA GRTVRAPHKT LAVVDHNVQT SDRSKGIEDP ESRTQLEALA ENVRDFGIEF YDALDQRQGI VHIIGPEQGF TLPGQTIVCG DSHTSTHGAF GALAHGIGTS EVEHVLATQT LIQRKAKNMR VTVDGTLPRG VSAKDIVLAI IGEIGTAGGT GHVIEYAGEA IRALSMEGRM TICNMSIEGG ARAGMVAPDE TTYAYVNGRP KAPKGAAFDA ARRYWESLAT DEGAHFDREI RLDAANLPPL VSWGTSPEDI VSILGTVPDP AQIADENKRQ SKEKALAYMG LTPGTRMTDV TLDRVFIGSC TNGRIEDLRI VAKMVEGRKV HDSVSAMVVP GSGLVKAQAE AEGIDRILKD AGFDWREPGC SMCLGMNPDK LRPGERCAST SNRNFEGRQG PRGRTHLVSP AMAAAAAVAG RFVDIREWRG
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