Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4342 |
Symbol | |
ID | 5832758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 4830381 |
End bp | 4830941 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641370133 |
Product | regulatory protein TetR |
Protein accession | YP_001641782 |
Protein GI | 163853739 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.525641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCAGA AGACGCGCAG CCGGCGCGAC GACCGTGCCG AAGTGATTCT CGACGCGGCG GGTGCGGTCC TGCGCCGGGG CGGCGCGCGC GCGCTGACCA TCGACGCCGT GGCGACGGAG GCAGGCCTGA GCAAGGGCGG CGTGCTGCAC CATTACGCCT CGAAGGATGC TCTGATCCTC GCCCTCGTCG GCCGCAAGCT GGAGGAGCTG CGCACCGGCA TCGCCGCCTG CGAGGCTGAG CGGGGCCCGG GCGCGACGGG GCTCGCGCTC GGCATGATCG AGCATCTGCG CCGCAGCTAT TGCGAGGAGG ACGAGTTCAG CCGCGCCCTT CTGCTCGCCT CCGCCGAGAA TCCGGATGCC CTCGCCGGCT ACCGGATGTT CGTGGCCGAG CGGCTCGCCC GGTTCGAGGC TGCGGAGGGG CCGGCCGGTG TCGGGGCCGC CCTGTTCTTC TCGCTGCTCG GCGTCGTGAT GGGCCGCACC CTCGGCTTCC ACGATCTGAG CGCCGCGCAG ATCGAACCGC TTCTGGGCGC GCTGGAACGG GCGGCGCAGG AACTGGGCTG A
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Protein sequence | MSQKTRSRRD DRAEVILDAA GAVLRRGGAR ALTIDAVATE AGLSKGGVLH HYASKDALIL ALVGRKLEEL RTGIAACEAE RGPGATGLAL GMIEHLRRSY CEEDEFSRAL LLASAENPDA LAGYRMFVAE RLARFEAAEG PAGVGAALFF SLLGVVMGRT LGFHDLSAAQ IEPLLGALER AAQELG
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