| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4331 |
|---|
| Symbol | |
|---|
| ID | 5832084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 4816418 |
|---|
| End bp | 4817116 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641370122 |
|---|
| Product | SNARE associated Golgi protein |
|---|
| Protein accession | YP_001641771 |
|---|
| Protein GI | 163853728 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0398] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAC CCAGCCGCTC GGCCCAGACC TGGGCAGCCA CGGCCGGCGC CGCCGCGCTG
GCGGTCGGAG CATGGTACCT CCTGCCCGTC GAGGACTGGC TGCGCGCCTT TTCGGACTGG
GCGAATGGCC TTGGTTCCTA CGGCCTCCTC GCCTTCGGCG TGCTGTTCCT CCTGGCGACC
CTTCTCGTCG TGCCGGGCAC CCCGCTCACC ATCGCCGGGG CCGTCGCCTT CGGCTGGGCG
GTGATGCCGG TGGTGCTGTT CTCGGCAACG CTCGGCTCCT GGCTCGCCTT CGTGGCCGCC
CGCCACCTGT TCCGCGAGCG GGTGCGGGGA CTGATCGAGC GCCGGCCGGC GCTGAACGCC
ACCGTGGAGG CGGTCGGCGA CGGCGGCTGG CGGCTCATGA CCCTGATGCG GCTCAGCCCC
TTCGTACCGT TCAACGCCCA GAACTACGTC TTCGGGGTGA CGGATGTCCG CACCTCCGCC
TATCTGGTCT CCACGGTGAT CGGCATGCTG CCGGGCACGG TGGTGTGCGT CTATCTCGGC
GTCATCGGCC GCCATGCCGG CAGCGACGAG CCGACCCACT GGATCACCCT CGGCCTCGGC
CTCCTCGCCA CCGTCGCGGC GGTGGAACTC ACCCGGCGCC GGGTGCGGGC CAAGCTCGAA
GCCGGCAAAC TTAAGCTGGG AAAGGCCGGG GCAGGATGA
|
|---|
| Protein sequence | MDKPSRSAQT WAATAGAAAL AVGAWYLLPV EDWLRAFSDW ANGLGSYGLL AFGVLFLLAT
LLVVPGTPLT IAGAVAFGWA VMPVVLFSAT LGSWLAFVAA RHLFRERVRG LIERRPALNA
TVEAVGDGGW RLMTLMRLSP FVPFNAQNYV FGVTDVRTSA YLVSTVIGML PGTVVCVYLG
VIGRHAGSDE PTHWITLGLG LLATVAAVEL TRRRVRAKLE AGKLKLGKAG AG
|
|---|
| |