Gene Mext_4273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4273 
Symbol 
ID5834329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4756071 
End bp4756994 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content71% 
IMG OID641370064 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001641713 
Protein GI163853670 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.685752 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCGC TGATCCTGCG CCGGATCGCC CAGAGCCTGC CGACCCTGTT CCTGGTGGTG 
GCGGGCAGCT TCTTCCTGAT CCGGCTGGCA CCCGGCGGCC CGTTCGATCT GGAGCGGCCG
CTGCCGCCGG CGGCGATGGA GAACCTGCGC CGGGTCTACG GCCTCGACCA GCCGCTGATC
GTGCAGTTCG GGCGCTACCT CTCGAGCCTC CTGCGGGGCG ATCTCGGGCC CTCCTTCACC
TTTCGCGATC TCACCGTCAC CGACCTGTTC GCCCGCGGCC TGCCCGTCTC CGTGACGCTC
GGCGGCCTCG CGCTTGTCCT CGCACTGGGC CTCGGCCTGG CGCTCGGGAG CCTCGCCGCC
TTCAACCGCA ATGGGGCCGC CGACCGGCTG GTGGGATTGG CCGCCTCGCT CGGGCTCGCG
GTGCCGAACT TCGTCACCGC GCCCCTGCTC CAGATCGTGT TCGGCCTCGG CCTCGCTTGG
CTCCCCGTCG GCGGATGGGC GGACGGCGCG CCGCAAAACC TCGTCCTGCC GGTGCTCACC
CTCGCTTTGC CCCACGCGGC GGGCATCGCC CGGCTCACCC GCGCCTCGCT CGGCGAGGTG
CTGATCCAGC CGCATATCCG CACGCAGCGC GCCATGGGTC TGTCGCGTGC CCGCATCGCC
CGGCACGCCC TGCGCGGGGC GCTGCTCCCT GTGGTCGCGA CCCTCGGGCC GCTGGCAGCG
GGGCTGATGA CCGGCTCGGT GGTGGTCGAG ACCATCTTCG GCCTGCCTGG CATCGGCCGC
TACTTCGTCG AGGGGGCGCT CAACCGCGAC TACACCCTGG TGATGGGCAC GGTGATTCTG
GTCGCGGTGA TGGTGATCGT CTTCAACCTG ATCGCCGACC TCATCGCCGC CACCCTCGAT
CCGCGCGTGA GGCTGTCGGC ATGA
 
Protein sequence
MIPLILRRIA QSLPTLFLVV AGSFFLIRLA PGGPFDLERP LPPAAMENLR RVYGLDQPLI 
VQFGRYLSSL LRGDLGPSFT FRDLTVTDLF ARGLPVSVTL GGLALVLALG LGLALGSLAA
FNRNGAADRL VGLAASLGLA VPNFVTAPLL QIVFGLGLAW LPVGGWADGA PQNLVLPVLT
LALPHAAGIA RLTRASLGEV LIQPHIRTQR AMGLSRARIA RHALRGALLP VVATLGPLAA
GLMTGSVVVE TIFGLPGIGR YFVEGALNRD YTLVMGTVIL VAVMVIVFNL IADLIAATLD
PRVRLSA