| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4272 |
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| Symbol | |
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| ID | 5834328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 4754476 |
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| End bp | 4756074 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641370063 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001641712 |
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| Protein GI | 163853669 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0380913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.650765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTCC CCCGCCGCAC CCTCCTGCAG ACCGGCGCGG CGCTCGCCGC CGGGCTCGCC
CTCCCCGCTC CCGCGCGGGC GGCCTCCCCC GTCTATCGCC GCGGCAACGA CGCCGACCCG
GAGACGCTCG ATCCGCACAA AACCTCGACG GTGGCCGAGG CGCATCTCCT GCGCGACCTG
TTCGAGGGGC TGCTGACCTA CGACAACCGC GGCACGATCA TTCCCGGCAT GGCCGAGCGT
TGGACCGTCT CCGATGACCG CCTCACCTAC CGCTTCACCC TGCGGCCGGA CGGGCGCTGG
TCGAACGGCG ATGCCGTGAC GGCCGACGAC TTCCTGTTCT CCCTGCGCCG CATCCTCGAT
CTGAAGACGG CGGCGAAATA CGCCGAGGTG CTGTTCCCGA TCCGGGGGGC GGCCGCCGTC
AATGCGGGTG AGCAACCGCC GGAGACGCTG GGGGTGACGG CCCCCGATCC CCGCACCCTG
GAAATCGGGC TCGCCGAGCC GGTGCCCTAC CTCCTCGAAC TCCTGACGCA CCAGACCTCG
CTGCCGGTCC ACCGCCCCTC GCTGGAGCGC TGGGGCGACG CCTTCGCGCG GCCCGGCAAC
CTCGTCTCGA ACGGCCCCTA CGCCCTGGTC GATTGGGTGC CGAACGACCG CATCACCCTG
ACGAAAAACC CGCATTACCG CGACGCCGCC GCGATCCCGA TCGAGCGGGT GGACGTCATC
CCGACTCCCG ACCTCGCCGC GGCGGTGCGG CGCTATGCGG CCGGCGAGAT CGATTCCCTC
TCGGACCTGC CCGCCGACCA GATCGCTTCG CTCAAGAGCC GCTTCGACCG CCAAGTGCAG
CTCGGACCGG GGCTCGGCCT GCTCGCCATC GCCTTCAACC TGCGAAAGAA ACCCTTCGAC
GACGCGCGGG TGCGCCGGGC CCTGTCGCTG GCCATCGACC GGGAATTTCT GGCCGAGATC
GTCTGGGGGC AGACCATGGC CCCGGCCTAT TCCTTCTGCC CGCCCGGCCT CGACAACGCC
CTGCCGCCCC CGCTCCTGCC GGGGCGCGAG GATGGGCCGA TCGACCGCGA GGAGGAGGCG
TTGCGGCTGC TGGCAGAAGC CGGCTACGGG CCGGGCAACC CGCTGACGGT CGAGTATCGC
TTCAACGTCA CCGACAACAA CCGCAACACG GCGATCGCGC TCGCGGATGC GTGGCGCGGC
ATCGGCGTCG TGACCCGCTT CGTCTCCACC GACGCCAAGA CCCACTTCGC GTATCTCCGC
GACGGCGGCC CCTTCGACCT CGCCCGGATG TCCTGGGTCG CCGACTATTC CGATCCGCAG
AATTTTCTCT TTTTGCTCCG CACCGGCAAT GACGGGTTCA ATGCCGGGCG CTGGTCGAAC
GCGCGCTTTG ACGAACTGCT GACGCGGGCG GCGCAGGAGC GCGACGTGCC GGCCCGCGCG
CGGATGCTGT TCGACGCCGA AACCCTCGTG CTCGACGAAC TGCCCTGGGT GCCGCTGCTG
CATTACCGCT CGAAGGCGCT CGTCTCGCCG CGGCTGCACG GGATGCACCC GAACATCCGC
AACGTCGCCC CCACCCGCTA TCTCCGGCTC GATCCATGA
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| Protein sequence | MSLPRRTLLQ TGAALAAGLA LPAPARAASP VYRRGNDADP ETLDPHKTST VAEAHLLRDL
FEGLLTYDNR GTIIPGMAER WTVSDDRLTY RFTLRPDGRW SNGDAVTADD FLFSLRRILD
LKTAAKYAEV LFPIRGAAAV NAGEQPPETL GVTAPDPRTL EIGLAEPVPY LLELLTHQTS
LPVHRPSLER WGDAFARPGN LVSNGPYALV DWVPNDRITL TKNPHYRDAA AIPIERVDVI
PTPDLAAAVR RYAAGEIDSL SDLPADQIAS LKSRFDRQVQ LGPGLGLLAI AFNLRKKPFD
DARVRRALSL AIDREFLAEI VWGQTMAPAY SFCPPGLDNA LPPPLLPGRE DGPIDREEEA
LRLLAEAGYG PGNPLTVEYR FNVTDNNRNT AIALADAWRG IGVVTRFVST DAKTHFAYLR
DGGPFDLARM SWVADYSDPQ NFLFLLRTGN DGFNAGRWSN ARFDELLTRA AQERDVPARA
RMLFDAETLV LDELPWVPLL HYRSKALVSP RLHGMHPNIR NVAPTRYLRL DP
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