| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4234 |
|---|
| Symbol | |
|---|
| ID | 5834910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 4712224 |
|---|
| End bp | 4713510 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641370025 |
|---|
| Product | seryl-tRNA synthetase |
|---|
| Protein accession | YP_001641674 |
|---|
| Protein GI | 163853631 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0172] Seryl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.905349 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGACA TCCGCGCCAT CCGCGAGAAC CCAGAGGCCT TCGACCGCGA TCTGGAGCGG
CGTGGCCTCG CGCCCCTCAG CGCCGAGCTG ATCGCCCTCG ACGACGCGCG CAAGGGTGCG
GTCTCGGCCG CGCAGGCGGC CCAGGAGCGG CGCAACGCGC TGTCCAAGGA GATCGGCGCC
GCCAAGAAGG CCAAGGACGA GGCCCGTGCG ACCGAGCTGA TGGCCGAGGT CGCCCGGCTG
AAGGAAGAGG CACCGGGCCT CGAAGCCGCG CAGGGGGAGG CCGCCAAGGC TCTCGACGAG
CGTCTCGCCG CGATCCCGAA CCGTCCGAAG GACGACGTGC CTCCCGGCGC CGACGAGCAC
GGCAATGTCG AGTACCGCCG CTTCGATTCC TCCCGTGAGC GCCTGGCGCA AGGGCGCCAG
CATTTCGAGC TCGGCGAGGC CACCGGGCTG ATGGATTTCG AGGCGGCCGC GAAACTCTCC
GGCTCTCGCT TCGTCGTGCT GAAGGGCCAG CTCGCCCGGC TGGAGCGGGC GCTCGGCCAG
TTCATGCTTG ACCTGCACAC GGGCGAGCAC GGCTATACCG AGGTGGTGCC GCCGGTCCTC
GTGCGTGAGG AAGCGATGTT CGGCACGGCG CAATTGCCGA AGTTCCGCGA TGATCAGTTC
GCGGCGGGCG AGAACTTCTG GCTGATCCCC ACGGCGGAAG TTCCGCTCAC CAACCTCGTG
CGCGAGAGCA TCCTGGCGGA GGACGAGCTT CCCTTGCGCT TCACCGCGCT CACCCCCTGC
TTCCGCGCCG AGGCCGGAGC GGCCGGGCGC GACACCCGCG GCATGCTGCG CCAGCACCAG
TTCAACAAGG TCGAGCTGGT CTCGATCACC GCACCCGAAA AGTCGGCCGA GGAGCACGAG
CGGATGCTCG CCTGCGCCGA GGCCGTGCTG CAGAAGCTCG ATCTCACCTA TCGCGTCATG
ACGCTGTGTA CCGGTGACAT GGGCTTTGCT TCCCAGAAAA CCTACGACAT CGAGGTCTGG
GTGCCGGGCC AGCAGACATA TCGCGAGATT TCGTCCTGCT CGGTCTGCGG CGAGTTCCAG
GCGCGGCGGA TGAATGCGCG CTACCGAGCC AAGGAGGGCA GGGGGGTCGG CTTCGTCCAC
ACCCTGAACG GCTCCGGCGT CGCGGTCGGC CGCGCGCTGA TCGCCGTGAT GGAGAACTAC
CAGAACCCCG ACGGCAGCGT CACGATCCCG TCGGCGCTCC AGCCCTACAT GGGCGGCCTC
ACCCGGATCG AGGGACCGAA GAACTGA
|
|---|
| Protein sequence | MHDIRAIREN PEAFDRDLER RGLAPLSAEL IALDDARKGA VSAAQAAQER RNALSKEIGA
AKKAKDEARA TELMAEVARL KEEAPGLEAA QGEAAKALDE RLAAIPNRPK DDVPPGADEH
GNVEYRRFDS SRERLAQGRQ HFELGEATGL MDFEAAAKLS GSRFVVLKGQ LARLERALGQ
FMLDLHTGEH GYTEVVPPVL VREEAMFGTA QLPKFRDDQF AAGENFWLIP TAEVPLTNLV
RESILAEDEL PLRFTALTPC FRAEAGAAGR DTRGMLRQHQ FNKVELVSIT APEKSAEEHE
RMLACAEAVL QKLDLTYRVM TLCTGDMGFA SQKTYDIEVW VPGQQTYREI SSCSVCGEFQ
ARRMNARYRA KEGRGVGFVH TLNGSGVAVG RALIAVMENY QNPDGSVTIP SALQPYMGGL
TRIEGPKN
|
|---|
| |