Gene Mext_4229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4229 
Symbol 
ID5834809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4707360 
End bp4707692 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content65% 
IMG OID641370020 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_001641669 
Protein GI163853626 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCACCC CCGCCTTCGC GCAAGGAGTC GGTGCCGGAA GCGGCGCGGA TGTCGCGTTG 
CAGTTCGTGC CCTTCGTCCT GATCTTCGTG ATCATGTATT TCCTGATCCT GCGCCCGCAG
CAGCGCCGGC TCAAGGATCA CCAGAACATG GTGAAGAACG TGCGCCGCGA GGACACCATC
GTGACCACCG GCGGCCTCGT CGGCCGCGTC ACGAAGGTCG CGGACGACGC CACCGAGATC
GAGGTCGAGA TCGCCCCGAA CGTGCGCGTG AAGGTGGTCC GCTCGATGAT CTCCGAGGTT
CGCGTCAAGG GCGCCCCGGT CAAGGCCTCC TGA
 
Protein sequence
MITPAFAQGV GAGSGADVAL QFVPFVLIFV IMYFLILRPQ QRRLKDHQNM VKNVRREDTI 
VTTGGLVGRV TKVADDATEI EVEIAPNVRV KVVRSMISEV RVKGAPVKAS