| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4225 |
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| Symbol | |
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| ID | 5834805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 4703100 |
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| End bp | 4703996 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641370016 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_001641665 |
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| Protein GI | 163853622 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0742858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCC CCGAGACCCG AACCGAGACG AGCCCGGAGG CCGGCAACGG CGGACTCGCC
TTCGCCTTCC GGCATTGCGA GGAACTGGTG CGCGAGAGCG ACCCGGACCG CTACTTCGCG
GCCCTGTTCG CGCCCGCCGC CTTCCGGCCG CACCTCTTCG CGCTCTCCGC TTTCAGCCTG
ACCATCGCCC GCGTCCGCGA GGCGGCCTCG AACCCGATGG CGGGGGAGAT CCGCTTGCAA
TGGTGGCGCG ACGCGCTCCA GGGGGAGGCG CGCGGCGACG TCCGGGCCAA CCCCGTCGCC
GCGGCCCTGG ACGATGCGAT CGTCACGCGC CGCCTCGGGC GCCAGCCCTT CGTCGATCTG
ATCGATGCCC GCGTCTTCGA CCTCTACGAC GATCCGATGC CGCGGGTGAA CGATCTGGAG
GGCTATTGCG GCGAGACCGC CTCGGCGCTG ATCCGCCTTT CCGGGCTGGT GCTCGCCGAC
GGGGCCGAGC CCGGCGGCGC GGCGGCCGCC GGCCATGCGG GCGTCGCCTA CGGCATCACC
GGCCTGTTGC GGGCGCTGCC GTGGCACGCG CGTCAGGGAC AGGTCTACCT GCCCGGTGAC
CTGCTGCGCC AGAACGGGGT CACGCGTGAG GACATCGTCT CGGGCCGGGG CGGGCCGGGC
CTCGTGCGCA CCTGCGCCGA ATTGCGGGCT CTGGCACGGC GCCACCTCGC CGCCTACGAG
GCGGCCCGCG GCACCATCGC TCCAGCGGCC CGTCCCGCCT TCCTGCCGAC GGCGCTGGTC
GAGCCCTATC TCGCGGCGAT GGAGCGGGCC GGCTACGATC CGCTCAACAG CGTGATCGAG
ATCCCCCGCT GGCGCCGCCT GTGGCGGCTG TGGCGGGCGG CGCGCACGGG GCGATAG
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| Protein sequence | MTRPETRTET SPEAGNGGLA FAFRHCEELV RESDPDRYFA ALFAPAAFRP HLFALSAFSL
TIARVREAAS NPMAGEIRLQ WWRDALQGEA RGDVRANPVA AALDDAIVTR RLGRQPFVDL
IDARVFDLYD DPMPRVNDLE GYCGETASAL IRLSGLVLAD GAEPGGAAAA GHAGVAYGIT
GLLRALPWHA RQGQVYLPGD LLRQNGVTRE DIVSGRGGPG LVRTCAELRA LARRHLAAYE
AARGTIAPAA RPAFLPTALV EPYLAAMERA GYDPLNSVIE IPRWRRLWRL WRAARTGR
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