Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_4204 |
Symbol | |
ID | 5833240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 4675402 |
End bp | 4678374 |
Gene Length | 2973 bp |
Protein Length | 990 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641369994 |
Product | D-lactate dehydrogenase (cytochrome) |
Protein accession | YP_001641644 |
Protein GI | 163853601 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0106272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.500842 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGGCGCGA GCGCGAAACC GGGCGAGTCA GCGTTCGAGG CACCGGCCTC CAGCGCGCGG GCGAAGGCCC GCAACGCGGC CGGATTGCCG CGCAAGCTCG CGGAGGTGCT GCAGGGCGAG GCTCGCTTCG ATGCCTTCAC CCGCGGACGC TACGCGACTG ACGCCTCGAT CTACCAGATC ATGCCGGCGG GCGTGGTCTT CCCCAAAAGT GCCGCCGACA TCGCCGCGAC GCTGAAGGTC GCGGCCGACT ACGACGTCCC CGTGATCCTG CGCGGTGGCG GCACCTCGCA GAACGGCCAG CCGATCGGCT CCGGCCTCGT GGTCGATTGC TCGCGCCACT TCAACGGCGT GCTCGCCTAC GACGCGGAAG GAGGCACAGT GACCGTCGAG CCCGGCCACG TGCTGGAGCG CCTCAACGCG CGGCTCAAGG CCGACGGCTG GTTCTTCCCC GTCGAGCCCT CGACCGCGAC CCGCTGCACC ATCGGCGGCA TGGCCGGCAA CAATTCGTGC GGCGCCCGCT CGCTCCGCTA CGGCAAGATG AGCGACAACG TGCTCGCCCT GGAGGCGCTG TTCCATGACG GCGCCGCCTT CGGCTTCGGG CTCACCGGCA ATGTGGCGAG CGCTGTCACC GGCGGCGCGC GGGCGGAAGA CCTCGCGCGA CGCATGCTCG CTCTAGCGGA TGCCCACCGC GACGAGATCG AGACGATGTA CCCGAAGGTG CAGCGGCGGG TCGGCGGCTA CAACCTCGAT TCCCTGATCG AACCGCGCCC GAACCTCGCC CACCTCCTCG TCGGCTCGGA GGGGACGCTC GCCGCCACCA CCGCGGTGAC GCTCAAGCTC TCCCGCCTGC CGGTCCACCG GGCCATGGGC GTGTGCCACT TCCCCTCGTT CCGCGCGGCG ATGGAGACGA CGAAGGCGAT CGTCGCCCTC GACCCCGTGG CGGTCGAACT CGTCGACAAC AACGTGCTCG TGCTCGGCGC CGACATCCCG CTGTTCCGCA CGACCCTGGC CGACATCACG CGGGGCCAGC CCAACTGCCT GCTGCTGGCC GAGTTCGCGG GCGACGACCT CGCCGCGCTG AAGCGCGACC TGAAGCGCCT CGACCAGTGC ATGGCCGATC ACGGCTTTCC CGACGCGGTC GTCGAGGTGG TGGAGCCGAA CCGCCAGAAG GCGGTCTGGG AGGTGCGCGA GGCCTGCCTC AACATCATGA TGTCGATGAA GGGGGACGCC AAACCCGTCT CCTTCATTGA GGATTGCGCC GTCCCCCTGG AGCATCTGGC CGACTACACC GACGCGGTCA CCGAGGTGTT CACGCGGCAC GGCACCCGCG GCACGTGGTA CGCCCACGCC TCCGTCGGTT GCCTGCATGT GCGCCCGATC CTCGACATGA AGCAGGGCGG CGACGTCCGG AAGATGCGCG CCATCGCCGA GGAGACGGCG GAGCTGGTGC GCCGCCACAA GGGCTCCTAT TCGGGCGAGC ACGGCGACGG CATCTCGCGC TCGGAGTTCG TGGAGCCGCT GTTCGGCCAA AAGCTCACCC GCGCCTTCGA GACGGTGAAG GACGGCTTCG ACCCCGACAA CCGCCTGAAC CCGAACAAGA TCGTTCGCCC GCTCAAGATG GACGACCGCA CGCTGATGCG CTTCGGCCCC GACTACGCGG TGAGCGAGCC GCAGAAGACA GCGCTGGACT GGTCGGATTG GGGCGGGTTC GGCCCGGCGG TCGAGATGTG CAACAACAAC GGCACCTGCC GGAAGCTCGC CGGCGGCGCG ATGTGCCCCT CCTACCGCGC CACCCGCGAC GAGCAGCACC TCACGCGGGG CCGCGCCAAC TCGCTGCGCC TCGCGATCTC GGGCCAGCTC GGGCCGGACG CATTCCTGTC GCCCGAGATG AAGCGCACGA TGGACCTGTG CGTCTCGTGC AAGGCCTGCC GGCGGGAATG CCCGACCGGC GTCGACATGG CCAAGATGAA GGTCGAGTTC CTGCACCACT ACCATGCCCG GCACGGCCTG CCGTTGACGG AGCGGCTGGT CGCCGAGATG CCGCGCTACG CCAGCGTCGC CGCAGCCCTC GCGCCGCTGC TCAACCTGCG CAACCGCTAC CCGGCGCTCG CCCGGTTCGG TGAGGCATGG ACCGGCTTCT CCGCCCGCCG CTCGCTGCCC GAATGGCGCC GGCCCTGGCG GGAGACCGGC GAGGTCGCCC ATCCCGAGGA CGTGGCGGGT GACCACCGCG ACCTCGTCCT GTTCGGCGAC ACCTTCAACC GCGCCTTCGA GCGCGAGAAC TTGGAAGCCG CCGAGCGGGT GCTGCGCGCC GCCGGCTACC GCCTGCACCG CGTCATCGCC CATGAGGGCC GCCGCCCGCT CTGCTGCGGC CGCACCTATC TCGCCTCCGG CCAGACCGAC CGGGCGCGGG AGGAGGCTCG GCGCACGCTC GACACGCTTC TGCCCTTCGT GCGGGCCGGT GCCCGCGTGG TCGGCCTGGA GCCCTCCTGC CTCCTCACCT TCCGCGACGA GTTTTTGTCC CTGCTGCCGC GGGCGGAGGC GAGCGAGTTG GCCCAGAGCG CCCTGCTGTT CGAGGAACTG CTCGCCACCG ATCTCGCCGC CGGCCGCATC AGCCTCCCGC TCGCCGACCA GGGCGGCCGG GTCGCCCACC TGCACGGCCA TTGCCACCAG AAGTCGTTCG GAGTGATGGG GTCGGTGGAG ACGGTGCTGC GCGCAGTGCC GGGGCTCGAC GTGCGCGTCA TCGAATCGAG CTGCTGCGGC ATGGCCGGCG CCTTCGGCTA CGGCAAGGAT ACGATCGACG TCTCCTTCGC CATGGCCGAG CTGTCGCTGT TCCCGGCTTT GCGGAAGGCG TCCGCCGACG ATCTCGTGGT CGCCGACGGC ACGAGCTGCC GCCACCAGAT CCACGACGGT CTCGGCCGCG ACGCGATCCA CGTCGCCCGC GTGCTCGATG CGGCCCTGAC GCCGGGGCGC TGA
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Protein sequence | MGASAKPGES AFEAPASSAR AKARNAAGLP RKLAEVLQGE ARFDAFTRGR YATDASIYQI MPAGVVFPKS AADIAATLKV AADYDVPVIL RGGGTSQNGQ PIGSGLVVDC SRHFNGVLAY DAEGGTVTVE PGHVLERLNA RLKADGWFFP VEPSTATRCT IGGMAGNNSC GARSLRYGKM SDNVLALEAL FHDGAAFGFG LTGNVASAVT GGARAEDLAR RMLALADAHR DEIETMYPKV QRRVGGYNLD SLIEPRPNLA HLLVGSEGTL AATTAVTLKL SRLPVHRAMG VCHFPSFRAA METTKAIVAL DPVAVELVDN NVLVLGADIP LFRTTLADIT RGQPNCLLLA EFAGDDLAAL KRDLKRLDQC MADHGFPDAV VEVVEPNRQK AVWEVREACL NIMMSMKGDA KPVSFIEDCA VPLEHLADYT DAVTEVFTRH GTRGTWYAHA SVGCLHVRPI LDMKQGGDVR KMRAIAEETA ELVRRHKGSY SGEHGDGISR SEFVEPLFGQ KLTRAFETVK DGFDPDNRLN PNKIVRPLKM DDRTLMRFGP DYAVSEPQKT ALDWSDWGGF GPAVEMCNNN GTCRKLAGGA MCPSYRATRD EQHLTRGRAN SLRLAISGQL GPDAFLSPEM KRTMDLCVSC KACRRECPTG VDMAKMKVEF LHHYHARHGL PLTERLVAEM PRYASVAAAL APLLNLRNRY PALARFGEAW TGFSARRSLP EWRRPWRETG EVAHPEDVAG DHRDLVLFGD TFNRAFEREN LEAAERVLRA AGYRLHRVIA HEGRRPLCCG RTYLASGQTD RAREEARRTL DTLLPFVRAG ARVVGLEPSC LLTFRDEFLS LLPRAEASEL AQSALLFEEL LATDLAAGRI SLPLADQGGR VAHLHGHCHQ KSFGVMGSVE TVLRAVPGLD VRVIESSCCG MAGAFGYGKD TIDVSFAMAE LSLFPALRKA SADDLVVADG TSCRHQIHDG LGRDAIHVAR VLDAALTPGR
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