Gene Mext_4204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4204 
Symbol 
ID5833240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4675402 
End bp4678374 
Gene Length2973 bp 
Protein Length990 aa 
Translation table11 
GC content71% 
IMG OID641369994 
ProductD-lactate dehydrogenase (cytochrome) 
Protein accessionYP_001641644 
Protein GI163853601 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0106272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.500842 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGCGCGA GCGCGAAACC GGGCGAGTCA GCGTTCGAGG CACCGGCCTC CAGCGCGCGG 
GCGAAGGCCC GCAACGCGGC CGGATTGCCG CGCAAGCTCG CGGAGGTGCT GCAGGGCGAG
GCTCGCTTCG ATGCCTTCAC CCGCGGACGC TACGCGACTG ACGCCTCGAT CTACCAGATC
ATGCCGGCGG GCGTGGTCTT CCCCAAAAGT GCCGCCGACA TCGCCGCGAC GCTGAAGGTC
GCGGCCGACT ACGACGTCCC CGTGATCCTG CGCGGTGGCG GCACCTCGCA GAACGGCCAG
CCGATCGGCT CCGGCCTCGT GGTCGATTGC TCGCGCCACT TCAACGGCGT GCTCGCCTAC
GACGCGGAAG GAGGCACAGT GACCGTCGAG CCCGGCCACG TGCTGGAGCG CCTCAACGCG
CGGCTCAAGG CCGACGGCTG GTTCTTCCCC GTCGAGCCCT CGACCGCGAC CCGCTGCACC
ATCGGCGGCA TGGCCGGCAA CAATTCGTGC GGCGCCCGCT CGCTCCGCTA CGGCAAGATG
AGCGACAACG TGCTCGCCCT GGAGGCGCTG TTCCATGACG GCGCCGCCTT CGGCTTCGGG
CTCACCGGCA ATGTGGCGAG CGCTGTCACC GGCGGCGCGC GGGCGGAAGA CCTCGCGCGA
CGCATGCTCG CTCTAGCGGA TGCCCACCGC GACGAGATCG AGACGATGTA CCCGAAGGTG
CAGCGGCGGG TCGGCGGCTA CAACCTCGAT TCCCTGATCG AACCGCGCCC GAACCTCGCC
CACCTCCTCG TCGGCTCGGA GGGGACGCTC GCCGCCACCA CCGCGGTGAC GCTCAAGCTC
TCCCGCCTGC CGGTCCACCG GGCCATGGGC GTGTGCCACT TCCCCTCGTT CCGCGCGGCG
ATGGAGACGA CGAAGGCGAT CGTCGCCCTC GACCCCGTGG CGGTCGAACT CGTCGACAAC
AACGTGCTCG TGCTCGGCGC CGACATCCCG CTGTTCCGCA CGACCCTGGC CGACATCACG
CGGGGCCAGC CCAACTGCCT GCTGCTGGCC GAGTTCGCGG GCGACGACCT CGCCGCGCTG
AAGCGCGACC TGAAGCGCCT CGACCAGTGC ATGGCCGATC ACGGCTTTCC CGACGCGGTC
GTCGAGGTGG TGGAGCCGAA CCGCCAGAAG GCGGTCTGGG AGGTGCGCGA GGCCTGCCTC
AACATCATGA TGTCGATGAA GGGGGACGCC AAACCCGTCT CCTTCATTGA GGATTGCGCC
GTCCCCCTGG AGCATCTGGC CGACTACACC GACGCGGTCA CCGAGGTGTT CACGCGGCAC
GGCACCCGCG GCACGTGGTA CGCCCACGCC TCCGTCGGTT GCCTGCATGT GCGCCCGATC
CTCGACATGA AGCAGGGCGG CGACGTCCGG AAGATGCGCG CCATCGCCGA GGAGACGGCG
GAGCTGGTGC GCCGCCACAA GGGCTCCTAT TCGGGCGAGC ACGGCGACGG CATCTCGCGC
TCGGAGTTCG TGGAGCCGCT GTTCGGCCAA AAGCTCACCC GCGCCTTCGA GACGGTGAAG
GACGGCTTCG ACCCCGACAA CCGCCTGAAC CCGAACAAGA TCGTTCGCCC GCTCAAGATG
GACGACCGCA CGCTGATGCG CTTCGGCCCC GACTACGCGG TGAGCGAGCC GCAGAAGACA
GCGCTGGACT GGTCGGATTG GGGCGGGTTC GGCCCGGCGG TCGAGATGTG CAACAACAAC
GGCACCTGCC GGAAGCTCGC CGGCGGCGCG ATGTGCCCCT CCTACCGCGC CACCCGCGAC
GAGCAGCACC TCACGCGGGG CCGCGCCAAC TCGCTGCGCC TCGCGATCTC GGGCCAGCTC
GGGCCGGACG CATTCCTGTC GCCCGAGATG AAGCGCACGA TGGACCTGTG CGTCTCGTGC
AAGGCCTGCC GGCGGGAATG CCCGACCGGC GTCGACATGG CCAAGATGAA GGTCGAGTTC
CTGCACCACT ACCATGCCCG GCACGGCCTG CCGTTGACGG AGCGGCTGGT CGCCGAGATG
CCGCGCTACG CCAGCGTCGC CGCAGCCCTC GCGCCGCTGC TCAACCTGCG CAACCGCTAC
CCGGCGCTCG CCCGGTTCGG TGAGGCATGG ACCGGCTTCT CCGCCCGCCG CTCGCTGCCC
GAATGGCGCC GGCCCTGGCG GGAGACCGGC GAGGTCGCCC ATCCCGAGGA CGTGGCGGGT
GACCACCGCG ACCTCGTCCT GTTCGGCGAC ACCTTCAACC GCGCCTTCGA GCGCGAGAAC
TTGGAAGCCG CCGAGCGGGT GCTGCGCGCC GCCGGCTACC GCCTGCACCG CGTCATCGCC
CATGAGGGCC GCCGCCCGCT CTGCTGCGGC CGCACCTATC TCGCCTCCGG CCAGACCGAC
CGGGCGCGGG AGGAGGCTCG GCGCACGCTC GACACGCTTC TGCCCTTCGT GCGGGCCGGT
GCCCGCGTGG TCGGCCTGGA GCCCTCCTGC CTCCTCACCT TCCGCGACGA GTTTTTGTCC
CTGCTGCCGC GGGCGGAGGC GAGCGAGTTG GCCCAGAGCG CCCTGCTGTT CGAGGAACTG
CTCGCCACCG ATCTCGCCGC CGGCCGCATC AGCCTCCCGC TCGCCGACCA GGGCGGCCGG
GTCGCCCACC TGCACGGCCA TTGCCACCAG AAGTCGTTCG GAGTGATGGG GTCGGTGGAG
ACGGTGCTGC GCGCAGTGCC GGGGCTCGAC GTGCGCGTCA TCGAATCGAG CTGCTGCGGC
ATGGCCGGCG CCTTCGGCTA CGGCAAGGAT ACGATCGACG TCTCCTTCGC CATGGCCGAG
CTGTCGCTGT TCCCGGCTTT GCGGAAGGCG TCCGCCGACG ATCTCGTGGT CGCCGACGGC
ACGAGCTGCC GCCACCAGAT CCACGACGGT CTCGGCCGCG ACGCGATCCA CGTCGCCCGC
GTGCTCGATG CGGCCCTGAC GCCGGGGCGC TGA
 
Protein sequence
MGASAKPGES AFEAPASSAR AKARNAAGLP RKLAEVLQGE ARFDAFTRGR YATDASIYQI 
MPAGVVFPKS AADIAATLKV AADYDVPVIL RGGGTSQNGQ PIGSGLVVDC SRHFNGVLAY
DAEGGTVTVE PGHVLERLNA RLKADGWFFP VEPSTATRCT IGGMAGNNSC GARSLRYGKM
SDNVLALEAL FHDGAAFGFG LTGNVASAVT GGARAEDLAR RMLALADAHR DEIETMYPKV
QRRVGGYNLD SLIEPRPNLA HLLVGSEGTL AATTAVTLKL SRLPVHRAMG VCHFPSFRAA
METTKAIVAL DPVAVELVDN NVLVLGADIP LFRTTLADIT RGQPNCLLLA EFAGDDLAAL
KRDLKRLDQC MADHGFPDAV VEVVEPNRQK AVWEVREACL NIMMSMKGDA KPVSFIEDCA
VPLEHLADYT DAVTEVFTRH GTRGTWYAHA SVGCLHVRPI LDMKQGGDVR KMRAIAEETA
ELVRRHKGSY SGEHGDGISR SEFVEPLFGQ KLTRAFETVK DGFDPDNRLN PNKIVRPLKM
DDRTLMRFGP DYAVSEPQKT ALDWSDWGGF GPAVEMCNNN GTCRKLAGGA MCPSYRATRD
EQHLTRGRAN SLRLAISGQL GPDAFLSPEM KRTMDLCVSC KACRRECPTG VDMAKMKVEF
LHHYHARHGL PLTERLVAEM PRYASVAAAL APLLNLRNRY PALARFGEAW TGFSARRSLP
EWRRPWRETG EVAHPEDVAG DHRDLVLFGD TFNRAFEREN LEAAERVLRA AGYRLHRVIA
HEGRRPLCCG RTYLASGQTD RAREEARRTL DTLLPFVRAG ARVVGLEPSC LLTFRDEFLS
LLPRAEASEL AQSALLFEEL LATDLAAGRI SLPLADQGGR VAHLHGHCHQ KSFGVMGSVE
TVLRAVPGLD VRVIESSCCG MAGAFGYGKD TIDVSFAMAE LSLFPALRKA SADDLVVADG
TSCRHQIHDG LGRDAIHVAR VLDAALTPGR