| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4195 |
|---|
| Symbol | |
|---|
| ID | 5833529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 4664960 |
|---|
| End bp | 4665664 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641369985 |
|---|
| Product | cyclic nucleotide-binding |
|---|
| Protein accession | YP_001641635 |
|---|
| Protein GI | 163853592 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.164725 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.773983 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGACAG CCCGGTTGGC GAGCATCCCG TTCTTCAAGG AACCGGGTGT CGATCTTTCC
CCATTCGAGA CGCGCTGCCA TTGGCGGCGC TTCGACGAGA ACGAGACGCT CGTCGATTAC
GACGACATCT CCACCGACGT GTACTTCCTC GCCATGGGGG AAGTGCGGAT CCTCAACCGG
TCGCAATCCG GCAAGGAGGT CATCCTCGGC GAGATGCGCG TGGGCGCCTT CTTCGGCGAG
CTGGCGGCAC TGGACGGCAT CGGCCGCTCG GCCAACGTCA CGGCGTTGAC CCGGGGTGAG
GTCTGTGTCG TCCCCGCCCC CGTCTTCCGC CAGATCGTGT TCGCTTCCGA GGTCATCGCC
GACCGGCTGT TCCGGCTGCT CGCCAAGCGC GTGCGCGAGT TGAACACCCG GCTGATGGAG
CACGCGCTGC TCGACCTGCG CCACCGTCTC TACGCCGAAT TGCTGCGCCT CTCCGTGCCG
CGGGCCGGGC AAGGGAGCGA TTCCGTGGGT GAGCGGGTGG TGACGCCGCC GCCCTACCAC
CACGTGCTGG CCGCCCGCAT CGGCTGCCGC CGGGAGCAGG TGACCCGCGA GTTCACGGTG
ATGGCGGGCG AAGGCCTGAT CGACCGCACC CGCGGCGCCC TCGTCATCCG CCGTCCCGAC
CTGTTGGAGG CTCGGGTGCA GGAGGCGCTG CGGGAGGACG CCTAG
|
|---|
| Protein sequence | MATARLASIP FFKEPGVDLS PFETRCHWRR FDENETLVDY DDISTDVYFL AMGEVRILNR
SQSGKEVILG EMRVGAFFGE LAALDGIGRS ANVTALTRGE VCVVPAPVFR QIVFASEVIA
DRLFRLLAKR VRELNTRLME HALLDLRHRL YAELLRLSVP RAGQGSDSVG ERVVTPPPYH
HVLAARIGCR REQVTREFTV MAGEGLIDRT RGALVIRRPD LLEARVQEAL REDA
|
|---|
| |