| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4130 |
|---|
| Symbol | |
|---|
| ID | 5833621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 4597733 |
|---|
| End bp | 4599256 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641369920 |
|---|
| Product | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| Protein accession | YP_001641570 |
|---|
| Protein GI | 163853527 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | [TIGR03022] Undecaprenyl-phosphate galactose phosphotransferase, WbaP
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.800255 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGACG TCGATGTCGC AAATACCAGT CTCCTGCCGG CCGGCGGAAC CGGCTGGCAG
GGACGACTTC GAGAGCGTCT CAAGGAGCGT CTCGGACCCG TCCGGTCCGG GCGCGCCGAG
ACGATCGCCG AGGCACGGCG CCGGATCGTC ACCGGTGCCC TGCTCGCGGG CGACACCGTC
GCCGTGCTGG TCGCCTGCGG GGGAAGCCTG CTCGTGATGG CAGCGGCCGG AGCAGCCGCC
GGCCTCGCGC CGGCCATGCT GACCGGCTGG TGCGCCCTGC AGATCTGCGC ACTGGCCCTG
TGCGGCCTCT ACGAACCGAT CGAGGCGGAG CCGATCGAGC GGCTCCGCCG CCGCGGCCTG
GCCGCCGCCC TCGCGTTCGC CGCCGCCATC CTGGTCGGCG GCGGGCCCTG GTCCTGGCCG
TGGTCCTGGG CCGCCACCGG GATCGCCGCC CTTCTCTCCA TCCCGCTTGG GCATTACGCG
GAGGGGTTCG TGCGTGCGCG TCTCGTCCGG CGGGGCGTGT GGGGGGCGGC GACCATCGTC
TACGGCGAGG GTGCCACCGA GCTGGCCCGC AGCCTCGCCG CGCGGCCGGA ACTCGGGCTC
CGACCGATCG GCATCGTCCG CGCGGCCGAT CAAGTGGTCG AGCCCTTCCG CACCGTCGTG
TCGCCGGGGC CAGGAGAGGA CACCGAGCGA GCGGCCGAGC GCATGGCGAG CCTGCTGGAG
GCGGCCGAGG TCGCCATCTG CACGCCCGGC GAACGCGAGC CCACCCGCTT CGCCTGGCTC
ACCCGGCACC CGTTCCGGCA GGTGCTCGTG GCGCACCATG CGCCGGAGGT GGAGACCGTG
CGCCTCAAGA CCCGCTGCCT CGGTCCCGTG GTCGGGCTCG TGGTGCGCCG GGCGATCTTC
CTGCCGCACA ACCTGCGGCT CAAGCGGGCG CTCGACCTTG CCGTGACGGT GCCGGGCCTT
CTCGTCTGCG GACCGCTGAT CGGTGTGCTG GCGCTCGCGG TGAAGATCGC TGATCCAGGC
CCGGCCTTCT ACGTCCAGCC CCGCGTCGGG CGGGATGGCC GCACCATCCG CGTGTACAAG
CTGCGCAGCA TGTTCCGCGA CGCGGAGGCG CGGCTCGCCG AGCATCTGGC CGCCGACGAG
GCCGCCCGGC GCGAATGGGA CCGGTTCTGC AAGCTGCGCA ACGATCCGCG CGTCCTGCCC
GGCATCGGCG GCTTCATCCG GCGCACCAGC CTCGACGAGC TGCCCCAGCT CCTCAACGTG
CTGCGCGGCG ACATGAGCGT GGTCGGGCCC CGCCCCTTCC CCGCCTACCA CACCGAGCGG
TTCGGCCCGG CCTTCCAGGC GCTGCGGGCG AGCGTGCCGC CGGGCCTGAC CGGACTGTGG
CAGATCTCGG CCCGCAGCGA CGGCGACCTC GCGGTGCAGG AGCAGCAGGA CAGCTTCTAC
ATCCGCAACT GGTCGATCTG GACCGACCTG TACATCCTTC TCGAGACGGT GCCGGCGGTG
CTCAGCGCCA AGGGCGCCCG CTGA
|
|---|
| Protein sequence | MPDVDVANTS LLPAGGTGWQ GRLRERLKER LGPVRSGRAE TIAEARRRIV TGALLAGDTV
AVLVACGGSL LVMAAAGAAA GLAPAMLTGW CALQICALAL CGLYEPIEAE PIERLRRRGL
AAALAFAAAI LVGGGPWSWP WSWAATGIAA LLSIPLGHYA EGFVRARLVR RGVWGAATIV
YGEGATELAR SLAARPELGL RPIGIVRAAD QVVEPFRTVV SPGPGEDTER AAERMASLLE
AAEVAICTPG EREPTRFAWL TRHPFRQVLV AHHAPEVETV RLKTRCLGPV VGLVVRRAIF
LPHNLRLKRA LDLAVTVPGL LVCGPLIGVL ALAVKIADPG PAFYVQPRVG RDGRTIRVYK
LRSMFRDAEA RLAEHLAADE AARREWDRFC KLRNDPRVLP GIGGFIRRTS LDELPQLLNV
LRGDMSVVGP RPFPAYHTER FGPAFQALRA SVPPGLTGLW QISARSDGDL AVQEQQDSFY
IRNWSIWTDL YILLETVPAV LSAKGAR
|
|---|
| |