| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4129 |
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| Symbol | |
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| ID | 5833620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 4595458 |
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| End bp | 4597662 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641369919 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_001641569 |
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| Protein GI | 163853526 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0489] ATPases involved in chromosome partitioning
[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.62537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCGT TCCACGAAGC CGACCCGCCC GGCGGCGGGC GATCGCTGAC CTCCCATTAC
GAGGCGGTCA CCGGACACGC CCTGGCGGTG CTCTGGCGGC GCCGGATCAT GATCGCCTCG
ATCGCCGTGC TGTCGGCGCT GGCAGCGGGG GCGGCCACGC TCGCCCTGCC GCCGAGCTAC
ACCGCCGAGG TGCTGCTCCA GTTCGATTTC GGCCAGACCC AGGATGTGCG CGGGACGGGC
AAGTCCGGCC CGCAGATCGC CCTCGAACCG GCTTCGGTCG TCGAGAGCGA GGCGCGCATC
ATCCGCTCGT TTGCCATCGC GCAATCCGTG GCGGGCCGGC TTGAGGACGC CGGGCAAGCC
AAGCAGGCGG CCCAGGCGGG GCCTGCCGCC AAGGAGGCCT CCGCGGGATG GGTCGGCTCC
CTGAGGCAGG CCCTCGAGAA CCGGGTTCAG GCCGCGCTGC CCGCCCTCCC CGGCACCCGT
CCGGAAGAAA CCGCGCAGCA GGAGACCGAG CGGGACGCCC AGGCCCAGCG GCTCCTGCGC
GGGCTTACCG TCGGCAACGA CGCCAAGGCC TACCTGATCA CCATCGGCTA CCGCGACCGC
GACCCGAAGC GGGCGGCGGA GACCGCCAAC ACCTTCGCCA CCGAGTATCT CGCCCGCAAG
ATGCAGGCGG CCTCGCTCGC CACCGAGCGG GCGAGCCGCT GGTACGCCGA GCAGATCCAG
GTCTCGCGCG GCGAACTCGC CCGGCTGGAC AGCGAGATCG ACGCCTTCCG CAAGCGCACG
GGCTTCGTCG AGTCGGTGCG CGAGGGCGTG GACCTGCGCG AGCAGCAGTT GCGCGACGCC
CTCACCGAAC TCTCCAGCGC CTCGGCCAAG CGGCTGGCGG AGGAGGCCCG GCTGCAGCGC
GCCGGGGACG TGATGCGCTT CGGCGGCGTG CCCAACGCCT CCGACACGAC GATCTCGCCG
GTGATCCAGC AGATGCTGGC CGATGACAGC AAGCTGCGCC AGGAACTGGA GCAGCTCACC
GCCGTCTCCG GCGACAACCA CCCCAGCGTG CTGCGGCTCA AGGCCTCGAT CGCCGCGCTC
CAGCAGCGGC TTCAGCTCCG CATGGCCGAG GTGCTGAAAC TGGTCGAGGT CGATCTCGGC
GCCGCCCGCG GGCTCGAAGC CTCGGCCGAG GCGCGGGTCG CGACCGTGCG CCGCTCGCTC
ATCGAGAGCA AGGCGCTCGA ATCGAAGCTC CGCGCACTCC AGGCCGACGC GACGGCCGCC
CGCGACCGCC TGCGCGTCCT CGACGAGGGC TACCAGACCG CCAACGCGCT GAGCGAACTC
AAGCCGGTGA TGGCGCAGAT GCTGGCGCCG GCCAAGGTGC CGACCCTGCC CACCGGGCCC
GGCCTCGGCC TGGTGCTCGG CCTCGGCCTG TTCGCCGGGG CCGGCGCCGG CTCGGTGCTG
GCGCTCGGGC TCGACCGCCG CGACCGGGGC TACCGCAGCC AGGGCGAGAT GGAGGCCGAG
ACCGGCCTGC CCTGCCTCGC GCTGCTGCCG AACCGGCCGG CGGGTGCGCA ATCGGGCGAG
CGCCTGGAAC AGGATCTCCT CTTCCGCGAG GCGGTGCGGG CGGCCGTGGC CGAACTCGTC
GCGGTGCGCG AGCCGCTCAA GGTCGTCCTC GTCACCTCGG CGATGCCCGG CGAGGGCAAG
TCCGTCGTCG CCCGCTCGGT GGCACGCTCG CTCGCCGCGA TGGGGCGCCG GGTGCTGATC
CTCGACGGCT CGCCCCGCCG CGCGGCGATC GAGGACGGTC GCCACGGCAA TCTCGGACAC
GAGACGCCCA CCGACGACGA GGAGGCGGAG GGCCGCATCT CGACCATCCG CCGCGTCTCC
GGCCTCAAGG ACGGGCACGA CATCTACGCC GAGCCGACCT TCGGCATGCT CGTGCGGGAG
GCGCGCGAGC GCTACGACAT CATCCTCGTA GAGGTGCCCC CGGTGCTGTT GCTGGGCGAC
GTCGCGCTCC TGCGCCAGCA CGCCGATGCC GTGGTCCATG TCGTGGCGTG GCACGGCACG
CAGAAGGCCG CCGTCACCGC GAGCCTCGCC TATATGCGCC GGCTCGGGCT GACGGTCGCC
GGGCTCGTCC TGAACAAGGT CGATCTGAAG CGCCACGAGG GCCGCGCCGC GGATCGCGGA
ACGCTCTACC GCGACTTCTC GCACTACTAC CGGAACAGCG CGTGA
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| Protein sequence | MDPFHEADPP GGGRSLTSHY EAVTGHALAV LWRRRIMIAS IAVLSALAAG AATLALPPSY
TAEVLLQFDF GQTQDVRGTG KSGPQIALEP ASVVESEARI IRSFAIAQSV AGRLEDAGQA
KQAAQAGPAA KEASAGWVGS LRQALENRVQ AALPALPGTR PEETAQQETE RDAQAQRLLR
GLTVGNDAKA YLITIGYRDR DPKRAAETAN TFATEYLARK MQAASLATER ASRWYAEQIQ
VSRGELARLD SEIDAFRKRT GFVESVREGV DLREQQLRDA LTELSSASAK RLAEEARLQR
AGDVMRFGGV PNASDTTISP VIQQMLADDS KLRQELEQLT AVSGDNHPSV LRLKASIAAL
QQRLQLRMAE VLKLVEVDLG AARGLEASAE ARVATVRRSL IESKALESKL RALQADATAA
RDRLRVLDEG YQTANALSEL KPVMAQMLAP AKVPTLPTGP GLGLVLGLGL FAGAGAGSVL
ALGLDRRDRG YRSQGEMEAE TGLPCLALLP NRPAGAQSGE RLEQDLLFRE AVRAAVAELV
AVREPLKVVL VTSAMPGEGK SVVARSVARS LAAMGRRVLI LDGSPRRAAI EDGRHGNLGH
ETPTDDEEAE GRISTIRRVS GLKDGHDIYA EPTFGMLVRE ARERYDIILV EVPPVLLLGD
VALLRQHADA VVHVVAWHGT QKAAVTASLA YMRRLGLTVA GLVLNKVDLK RHEGRAADRG
TLYRDFSHYY RNSA
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