| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4096 |
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| Symbol | mnmA |
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| ID | 5832519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 4555800 |
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| End bp | 4557032 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641369887 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001641537 |
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| Protein GI | 163853494 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0972824 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCGG ACCCCACGGT CCGGTGCGCG CCCGAAGGCT CCGCCAACGG CCGGCACCCG
GCCCCATCAC CGGCCATGAA CTCGCTGGAT CTCCCGAAGC CCCCGCACGA GACGCGCGTC
GTCGTTGCCA TGTCGGGCGG CGTCGATTCG TCGGTCGTGG CCGGCCTGCT GAAGCGCGAG
GGCTACGACG TCGTCGGCGT CACGCTCCAG CTCTACGATC ACGGCGCGGC GACCCATCGC
AAGGGGGCCT GCTGCGCCGG CCGCGACATC CACGATGCGC GGGCAGTGGC CGAGACGCTC
GGCATTCCCC ATTACGTCCT CGACTACGAG GACCGCTTCC GGGAATCGGT GATCGACCGT
TTCGCCGAGA GCTACCTCTC GGGCGAGACG CCGATCCCCT GCGTCGAGTG CAATCGCTCG
GTGAAGTTCC GCGACCTGCT CGGCCTCGCC CGCGACCTCG GGGCGGAGGC TTTGGCGACC
GGCCATTACG TGGCGAGCCG GGCGCGGCCG GAGGGCGGAC GCGCACTCTA CCGCGCCCTC
GATCCGGCCC GCGACCAGAG CTACTTCCTC TACGCCACGA CACCGGAACA GCTCGCCTAT
CTGCGCTTTC CCCTGGGCGA GCGACCCAAG GACGAGACCC GTGCCTTGGC ACGGGAGCTG
GGCCTCGCCG TCGCCGACAA GGCCGACAGC CAGGACATCT GCTTCGTGCC CCAGGGCGGC
TATGCCGACG TGATCGCCAA GCTCCGGCCG GAGGCGACCC GCCCCGGCGA GATCGTCGAT
CTCGACGGCC GGCGCCTCGG CGAGCACGAG GGCATCATCC ATTACACGGT GGGCCAGCGC
CGCGGCCTCA AGCTCTCGGC CGGCGAACCG CTCTACGTGG TGCGGCTGGA GCCGGAGACC
GCCCGCGTCG TGGTCGGCCC CCGCGCCGCG CTCGCCACCC GCCGCATTCG GCTCACTGAT
CTCAACTGGC TCGGCGACGG CGCGCCAGAG GACATCGCGG AGCGGCCCGT GGCCGTGCGC
GTGCGCTCGA CCCGCGAGCC GCGGCCCGCG CGTCTGTCGT GGAACGCGGC CGAGGCCTGC
GCCGAGGTCG AACTGCTCGT TCCCGAGGAC GGGGTCTCGC CGGGTCAGGC CTGCGTGATC
TACGCCGATG ACGACCCGCG CGCGCAGGTG CTCGGCGGCG GCACCATCCG GCGCATCGGC
GCGTTGCAGG CAGGCGCCGC CGAGGCCGCC TGA
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| Protein sequence | MRPDPTVRCA PEGSANGRHP APSPAMNSLD LPKPPHETRV VVAMSGGVDS SVVAGLLKRE
GYDVVGVTLQ LYDHGAATHR KGACCAGRDI HDARAVAETL GIPHYVLDYE DRFRESVIDR
FAESYLSGET PIPCVECNRS VKFRDLLGLA RDLGAEALAT GHYVASRARP EGGRALYRAL
DPARDQSYFL YATTPEQLAY LRFPLGERPK DETRALAREL GLAVADKADS QDICFVPQGG
YADVIAKLRP EATRPGEIVD LDGRRLGEHE GIIHYTVGQR RGLKLSAGEP LYVVRLEPET
ARVVVGPRAA LATRRIRLTD LNWLGDGAPE DIAERPVAVR VRSTREPRPA RLSWNAAEAC
AEVELLVPED GVSPGQACVI YADDDPRAQV LGGGTIRRIG ALQAGAAEAA
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