| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_4088 |
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| Symbol | |
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| ID | 5831736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 4547558 |
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| End bp | 4548931 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641369879 |
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| Product | sigma-54 factor interaction domain-containing protein |
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| Protein accession | YP_001641529 |
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| Protein GI | 163853486 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0065577 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.672706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCTGC TCATCGTCGG ACGGCTCTCG AGCGAACTCG TCACCGCCTC GAAGATGGCC
ATGAACCGGG GCGCCTCGGT CACCCACGCC GACGGGATCG ACCAGGGGCT CGCGACCCTG
CGCGCCAAGG GCGGCGACCT CGTCATGGTC GATGTCGGGC TCGACATCCG CCGGCTGGTG
CAGGCCCTGT CCGACGAGCG CATCCGCACG CCGGTGGTGG CCTGCGGCAT CGCCTCCGAC
GCCCGCGCCG CGGTGGCGGC GATCCAGGCG GGCGCCAAGG AGTACATCCC CCTCCCCCCC
GATCCCGAAT TGATCGCGGC GGTCCTGGAG GCCGTGGCGG CGGACGCCCG CAGTTTCATC
TGGCGCGATC CGTCCATGGA GCGCGTGGTG CGGCTCGCCG AGCAGGTCGC CCGCTCGGAA
GCCTCCGTGC TCATCACCGG CGAGAGCGGC ACCGGCAAGG AGGTGCTGGC CCGCCACGTC
CACGCCAAGT CGAACCGGGC GGGCCGCCCG TTCGTCTCGG TCAACTGCGC GGCAATCCCT
GAGGCCCTGC TCGAATCCGA GCTGTTCGGC CACGAGAAGG GCGCCTTCAC CGGCGCGGTC
GCCCGGCGCA TCGGCCGGTT CGAGGAGGCC AATGGCGGCA CGCTGCTCCT CGACGAAATC
TCCGAGATGG ACGTGCGGCT GCAATCCAAG CTGCTGCGCG CGCTGCAGGA GCGGGTGATC
GACCGGGTCG GCGGAGCCGC CCCCGTCAAG GTGGATATCC GCGTGCTCGC CACCTCCAAC
CGCAACCTCG CCGACGAGGT GAAGAAGGGC ACGTTCCGCG AGGATCTGTA CTACCGCCTC
AACGTCGTGC ACCTGCGCCT GCCCGCCTTG CGCGAGCGGC TGGCCGACAT CCTCGAACTC
ACCGCCCATT TCGCCCGCAA ATACGCGGAG CTGAACGGGC TGCCGCTGCG TCCGCTGGCC
CGCGAGGCGC AGGCTCTGGT CGCCCGCAAC CCCTGGCCCG GCAACGTGCG CGAGTTGGAG
AACACGATCC ACCGCGCGGT GCTCCTGGCG CAGGGGGCCG AGATCGGTCC GGAGGCGATC
CTGAGCCCGG AGGGCGAATC GCTCGCGGCG CCGACGGCGG CCTCCGGCCC GGTCGAGCGG
GCGGCGAGCG CGGCGGAGGC GGCCACCCGC GGGCTGGTCG GACGCACCGT GGCGGATGTC
GAGCGCGACC TGATCCTCGA CACCCTCGAC CATTGCCTCG GCAACCGCAC CCACGCGGCG
CGCATCCTCG GCATCTCGAT CCGGACACTG CGCAACAAGC TCAACGAGTA TGTCGAGGCC
GGCGTGAAGG TGGCCGAGCC CGGCGGCGTC CGGGCCATGG CAGCCTATGG CTGA
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| Protein sequence | MRLLIVGRLS SELVTASKMA MNRGASVTHA DGIDQGLATL RAKGGDLVMV DVGLDIRRLV
QALSDERIRT PVVACGIASD ARAAVAAIQA GAKEYIPLPP DPELIAAVLE AVAADARSFI
WRDPSMERVV RLAEQVARSE ASVLITGESG TGKEVLARHV HAKSNRAGRP FVSVNCAAIP
EALLESELFG HEKGAFTGAV ARRIGRFEEA NGGTLLLDEI SEMDVRLQSK LLRALQERVI
DRVGGAAPVK VDIRVLATSN RNLADEVKKG TFREDLYYRL NVVHLRLPAL RERLADILEL
TAHFARKYAE LNGLPLRPLA REAQALVARN PWPGNVRELE NTIHRAVLLA QGAEIGPEAI
LSPEGESLAA PTAASGPVER AASAAEAATR GLVGRTVADV ERDLILDTLD HCLGNRTHAA
RILGISIRTL RNKLNEYVEA GVKVAEPGGV RAMAAYG
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