Gene Mext_4080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_4080 
Symbol 
ID5831023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp4537798 
End bp4539180 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content73% 
IMG OID641369871 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001641521 
Protein GI163853478 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.546306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGACC TCTCCTGCGA CGTCGCGGTG ATCGGGGCCG GCACCGCCGG CATCGCCGCC 
CACCGCGCCG CCCTCAATGC CGGCGTCCGC TCCGTGCTGA TCGAGCAGGG CCCCGGCGGC
ACCACCTGCG CCCGCGTCGG CTGCATGCCC TCGAAGCTGC TGATCACCAC GGCCGAGGCC
GCGCAGGAGG CCCGCGCGGC GCACCGGCTC GGCATCCGCG TCGGCGCGGT GCGGGTCGAT
GGCCCGGCGG TGCTGGCCCG GATGCGGCGC CTGCGCGACC GCTTCGTGGA ATCCGTTTTC
GAGGGGATCG ATGCCTTCCC CGACGAGACC CGCCTCACGG GGCGGGCCGT GTTCGAGGGG
CCGGATGCCT TGCGCATCGA CAACCACACC CGCCTGCGCT TCAAGGCGGC GGTGCTGGCA
ACCGGCTCCA GCCCGAGCGT GCCCGAGCCG CTGAAGGGGC TGGGTGACCG GGTTCTCACC
ACCGACACCG TGTTCGAGAT CGAGGATCTG CCGGCCTCGC TCGCCGTGCT CGGCGCCGGC
CCGGTCGGGC TGGAACTCGC CCAGGCCATG GCCCGGCTCG GTGTGGCGAC CAGCGTGTTC
GATCCCGGCG ACAGTCTCGG CGGCTTGCGC GACCCCGATC TGAAGCGGGC CGCCCGCGCG
ATCTTTTCGG AGGCCTTCGA TCTCCATCTC GGCGCGAAGG TCGAGAGCGG TGAGATCGCG
GGCGAGGGCG CGCGCCTCGG CTGGGACGGA GCCGGGGCCA AGGGAGACAA GACGTTCGAT
CGGGTGCTCG CCGCCGCGGG CCGTCCGCCG AACGTTTCGG CAATTGGCCT GGAGCACACC
GGTGCGACCC TCAATGACAA GGGCGGCCCG GTCCACGATC CCCGCTCACT GCTCTGCGAG
GGCGCGCCGA TCCTGATCGC GGGCGACGCC AATGCCGACC GCCCGGTTCT GCACGAGGCG
AGCCGTCAGG GCCGCATCGC CGGGCGCAAC GCCGCGCGGC TCGCCCGCGG CGAGGGGGCC
GAGCGGCCGG AGCGCTGGGT CGCACTCACC ATGGTGTTCA GCGATCCGCA GATCGCCGTG
ATCGGCGGCG GCTTCGACCC GCAAGCGGAT CACCGCGTCG GCCGCGCCGA TTTCTGCGAC
CAGGGCCGGG CTCGGGTGAT GGACCGGGCG CAGGGCGGTA TCCGCCTCTA CGCGGAGGCC
GACGGGCGCC TTGCCGCCGC CGAGCTGATC GGCCCGGAGG CCGAGCATCT CGGTCATCTC
CTGGCCTATG CGGTGCAGGA CGGGCTGGAC GTGCGGCGTT TGCGCGACCG CCCGTTCTAT
CATCCGACTC TGGAAGAGGG CCTCGACACG GCGCTCTCGG ATCTCGGCGA TCACCTGAAG
TAA
 
Protein sequence
MRDLSCDVAV IGAGTAGIAA HRAALNAGVR SVLIEQGPGG TTCARVGCMP SKLLITTAEA 
AQEARAAHRL GIRVGAVRVD GPAVLARMRR LRDRFVESVF EGIDAFPDET RLTGRAVFEG
PDALRIDNHT RLRFKAAVLA TGSSPSVPEP LKGLGDRVLT TDTVFEIEDL PASLAVLGAG
PVGLELAQAM ARLGVATSVF DPGDSLGGLR DPDLKRAARA IFSEAFDLHL GAKVESGEIA
GEGARLGWDG AGAKGDKTFD RVLAAAGRPP NVSAIGLEHT GATLNDKGGP VHDPRSLLCE
GAPILIAGDA NADRPVLHEA SRQGRIAGRN AARLARGEGA ERPERWVALT MVFSDPQIAV
IGGGFDPQAD HRVGRADFCD QGRARVMDRA QGGIRLYAEA DGRLAAAELI GPEAEHLGHL
LAYAVQDGLD VRRLRDRPFY HPTLEEGLDT ALSDLGDHLK